bioplex

Documentation

Overview

Package bioplex reads a Bioplex interaction file

Index

• type Entry
  • func Read(filename string) []Entry
• type Interaction

Types

type Entry

type Entry struct {
	Entrez  Interaction
	Symbol  Interaction
	UniProt Interaction
}

Entry contains Entrez, gene symbol and UniProt IDs for each interaction.

func Read

func Read(filename string) []Entry

Read a BioPlex interation file.

type Interaction

type Interaction struct {
	Source string
	Target string
}

Interaction details for an entry in BioPlex