seqio

package

v0.0.0-...-25502c3 Latest Latest Go to latest Published: Oct 9, 2012 License: GPL-3.0 Imports: 1 Imported by: 0

Details

Packages for reading and writing sequence files

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type Reader interface {
	Read() (seq.Sequence, error)
}

type Sequence interface {
	seq.Polymer
	seq.Sequence
}

A Sequence is a generic sequence type.

type SequenceAppender interface {
	seq.Appender
	Sequence
}

A SequenceAppender is a generic sequence type that can append elements.

type Writer interface {
	Write(Sequence) (int, error)
}

Path	Synopsis
fasta Package to read and write FASTA format files	Package to read and write FASTA format files
fastq Package to read and write FASTQ format files	Package to read and write FASTQ format files