org_antha_lang_antha_v1

package
v0.0.0-...-040724e Latest Latest
Warning

This package is not in the latest version of its module.

 Go to latest Published: Jun 6, 2019 License: BSD-3-Clause, GPL-2.0 Imports: 5 Imported by: 6

Documentation

Overview

Package org_antha_lang_antha_v1 is a generated protocol buffer package.

It is generated from these files: 

github.com/antha-lang/antha/api/v1/coord.proto
github.com/antha-lang/antha/api/v1/inventory.proto
github.com/antha-lang/antha/api/v1/measurement.proto
github.com/antha-lang/antha/api/v1/message.proto
github.com/antha-lang/antha/api/v1/state.proto
github.com/antha-lang/antha/api/v1/task.proto
github.com/antha-lang/antha/api/v1/blob.proto
github.com/antha-lang/antha/api/v1/polynomial.proto
github.com/antha-lang/antha/api/v1/workflow.proto
github.com/antha-lang/antha/api/v1/empty.proto
github.com/antha-lang/antha/api/v1/element.proto
github.com/antha-lang/antha/api/v1/device.proto

It has these top-level messages: 

OrdinalCoord
PhysicalCoord
InventoryItem
None
Tipbox
Tipwaste
DeckPosition
Plate
Well
Component
PlateType
Measurement
GrpcMessage
GrpcCall
Status
Task
OrderTask
DeckLayoutTask
PlatePrepTask
PlatePrep
DocumentTask
MixerTask
MixerState
Placement
ManualRunTask
IncubateTask
DataUploadTask
Blob
FromBytes
FromHostFile
Polynomial
Workflow
Element
Connection
ProcessAddress
MixerConfig
Empty
ElementMetadata
DeviceMetadata

Index

Constants

This section is empty.

Variables

View Source 
var ElementStage_name = map[int32]string{
	0: "STEPS",
	1: "ANALYSIS",
}
View Source 
var ElementStage_value = map[string]int32{
	"STEPS":    0,
	"ANALYSIS": 1,
}
View Source 
var State_name = map[int32]string{
	0: "CREATED",
	1: "SCHEDULED",
	2: "WAITING",
	3: "RUNNING",
	4: "SUCCEEDED",
	5: "FAILED",
}
View Source 
var State_value = map[string]int32{
	"CREATED":   0,
	"SCHEDULED": 1,
	"WAITING":   2,
	"RUNNING":   3,
	"SUCCEEDED": 4,
	"FAILED":    5,
}

Functions

This section is empty.

Types

type Blob 

type Blob struct {
	// A descriptive name.
	Name string `protobuf:"bytes,1,opt,name=name" json:"name,omitempty"`
	// Types that are valid to be assigned to From:
	//	*Blob_Bytes
	//	*Blob_HostFile
	From isBlob_From `protobuf_oneof:"from"`
}

Unstructured data

func (*Blob) Descriptor 

func (*Blob) Descriptor() ([]byte, []int)

func (*Blob) GetBytes 

func (m *Blob) GetBytes() *FromBytes

func (*Blob) GetFrom 

func (m *Blob) GetFrom() isBlob_From

func (*Blob) GetHostFile 

func (m *Blob) GetHostFile() *FromHostFile

func (*Blob) GetName 

func (m *Blob) GetName() string

func (*Blob) ProtoMessage 

func (*Blob) ProtoMessage()

func (*Blob) Reset 

func (m *Blob) Reset()

func (*Blob) String 

func (m *Blob) String() string

func (*Blob) XXX_OneofFuncs 

func (*Blob) XXX_OneofFuncs() (func(msg proto.Message, b *proto.Buffer) error, func(msg proto.Message, tag, wire int, b *proto.Buffer) (bool, error), func(msg proto.Message) (n int), []interface{})

XXX_OneofFuncs is for the internal use of the proto package.

type Blob_Bytes 

type Blob_Bytes struct {
	Bytes *FromBytes `protobuf:"bytes,2,opt,name=bytes,oneof"`
}

type Blob_HostFile 

type Blob_HostFile struct {
	HostFile *FromHostFile `protobuf:"bytes,3,opt,name=host_file,json=hostFile,oneof"`
}

type Component 

type Component struct {
	// Component type
	Type string `protobuf:"bytes,1,opt,name=type" json:"type,omitempty"`
	// Name
	Name string `protobuf:"bytes,2,opt,name=name" json:"name,omitempty"`
	// Volume
	Volume *Measurement `protobuf:"bytes,3,opt,name=volume" json:"volume,omitempty"`
	// Viscosity
	Viscosity *Measurement `protobuf:"bytes,4,opt,name=viscosity" json:"viscosity,omitempty"`
	// Mass
	Mass *Measurement `protobuf:"bytes,5,opt,name=mass" json:"mass,omitempty"`
	// Amount (moles)
	Amount *Measurement `protobuf:"bytes,6,opt,name=amount" json:"amount,omitempty"`
	// If non-atomic component, this is what we are comprised of
	Components []*Component `protobuf:"bytes,7,rep,name=components" json:"components,omitempty"`
}

Physical component, typically a liquid

func (*Component) Descriptor 

func (*Component) Descriptor() ([]byte, []int)

func (*Component) GetAmount 

func (m *Component) GetAmount() *Measurement

func (*Component) GetComponents 

func (m *Component) GetComponents() []*Component

func (*Component) GetMass 

func (m *Component) GetMass() *Measurement

func (*Component) GetName 

func (m *Component) GetName() string

func (*Component) GetType 

func (m *Component) GetType() string

func (*Component) GetViscosity 

func (m *Component) GetViscosity() *Measurement

func (*Component) GetVolume 

func (m *Component) GetVolume() *Measurement

func (*Component) ProtoMessage 

func (*Component) ProtoMessage()

func (*Component) Reset 

func (m *Component) Reset()

func (*Component) String 

func (m *Component) String() string

type Connection 

type Connection struct {
	Source *ProcessAddress `protobuf:"bytes,1,opt,name=source" json:"source,omitempty"`
	Target *ProcessAddress `protobuf:"bytes,2,opt,name=target" json:"target,omitempty"`
}

func (*Connection) Descriptor 

func (*Connection) Descriptor() ([]byte, []int)

func (*Connection) GetSource 

func (m *Connection) GetSource() *ProcessAddress

func (*Connection) GetTarget 

func (m *Connection) GetTarget() *ProcessAddress

func (*Connection) ProtoMessage 

func (*Connection) ProtoMessage()

func (*Connection) Reset 

func (m *Connection) Reset()

func (*Connection) String 

func (m *Connection) String() string

type DataUploadTask 

type DataUploadTask struct {
}

Upload data

func (*DataUploadTask) Descriptor 

func (*DataUploadTask) Descriptor() ([]byte, []int)

func (*DataUploadTask) ProtoMessage 

func (*DataUploadTask) ProtoMessage()

func (*DataUploadTask) Reset 

func (m *DataUploadTask) Reset()

func (*DataUploadTask) String 

func (m *DataUploadTask) String() string

type DeckLayoutTask 

type DeckLayoutTask struct {
	// Mixer task to show deck layout of
	MixerTaskId string `protobuf:"bytes,1,opt,name=mixer_task_id,json=mixerTaskId" json:"mixer_task_id,omitempty"`
	// If present, restrict layout to given deck positions, e.g.,
	SomePositions []*OrdinalCoord `protobuf:"bytes,2,rep,name=some_positions,json=somePositions" json:"some_positions,omitempty"`
}

Show deck layout for mixer

func (*DeckLayoutTask) Descriptor 

func (*DeckLayoutTask) Descriptor() ([]byte, []int)

func (*DeckLayoutTask) GetMixerTaskId 

func (m *DeckLayoutTask) GetMixerTaskId() string

func (*DeckLayoutTask) GetSomePositions 

func (m *DeckLayoutTask) GetSomePositions() []*OrdinalCoord

func (*DeckLayoutTask) ProtoMessage 

func (*DeckLayoutTask) ProtoMessage()

func (*DeckLayoutTask) Reset 

func (m *DeckLayoutTask) Reset()

func (*DeckLayoutTask) String 

func (m *DeckLayoutTask) String() string

type DeckPosition 

type DeckPosition struct {
	// Position
	Position string `protobuf:"bytes,1,opt,name=position" json:"position,omitempty"`
}

Synthetic inventory item to represent position on deck

func (*DeckPosition) Descriptor 

func (*DeckPosition) Descriptor() ([]byte, []int)

func (*DeckPosition) GetPosition 

func (m *DeckPosition) GetPosition() string

func (*DeckPosition) ProtoMessage 

func (*DeckPosition) ProtoMessage()

func (*DeckPosition) Reset 

func (m *DeckPosition) Reset()

func (*DeckPosition) String 

func (m *DeckPosition) String() string

type DeviceMetadata 

type DeviceMetadata struct {
	Tags []string `protobuf:"bytes,1,rep,name=tags" json:"tags,omitempty"`
}

func (*DeviceMetadata) Descriptor 

func (*DeviceMetadata) Descriptor() ([]byte, []int)

func (*DeviceMetadata) GetTags 

func (m *DeviceMetadata) GetTags() []string

func (*DeviceMetadata) ProtoMessage 

func (*DeviceMetadata) ProtoMessage()

func (*DeviceMetadata) Reset 

func (m *DeviceMetadata) Reset()

func (*DeviceMetadata) String 

func (m *DeviceMetadata) String() string

type DocumentTask 

type DocumentTask struct {
	// Unformated text to show
	TextBody string `protobuf:"bytes,1,opt,name=text_body,json=textBody" json:"text_body,omitempty"`
}

Show documentation

func (*DocumentTask) Descriptor 

func (*DocumentTask) Descriptor() ([]byte, []int)

func (*DocumentTask) GetTextBody 

func (m *DocumentTask) GetTextBody() string

func (*DocumentTask) ProtoMessage 

func (*DocumentTask) ProtoMessage()

func (*DocumentTask) Reset 

func (m *DocumentTask) Reset()

func (*DocumentTask) String 

func (m *DocumentTask) String() string

type Element 

type Element struct {
	Id string `protobuf:"bytes,1,opt,name=id" json:"id,omitempty"`
}

func (*Element) Descriptor 

func (*Element) Descriptor() ([]byte, []int)

func (*Element) GetId 

func (m *Element) GetId() string

func (*Element) ProtoMessage 

func (*Element) ProtoMessage()

func (*Element) Reset 

func (m *Element) Reset()

func (*Element) String 

func (m *Element) String() string

type ElementMetadata 

type ElementMetadata struct {
	SourceSha256 []byte `protobuf:"bytes,1,opt,name=source_sha256,json=sourceSha256,proto3" json:"source_sha256,omitempty"`
}

func (*ElementMetadata) Descriptor 

func (*ElementMetadata) Descriptor() ([]byte, []int)

func (*ElementMetadata) GetSourceSha256 

func (m *ElementMetadata) GetSourceSha256() []byte

func (*ElementMetadata) ProtoMessage 

func (*ElementMetadata) ProtoMessage()

func (*ElementMetadata) Reset 

func (m *ElementMetadata) Reset()

func (*ElementMetadata) String 

func (m *ElementMetadata) String() string

type ElementStage 

type ElementStage int32
const (
	ElementStage_STEPS    ElementStage = 0
	ElementStage_ANALYSIS ElementStage = 1
)

func (ElementStage) EnumDescriptor 

func (ElementStage) EnumDescriptor() ([]byte, []int)

func (ElementStage) String 

func (x ElementStage) String() string

type Empty 

type Empty struct {
}

func (*Empty) Descriptor 

func (*Empty) Descriptor() ([]byte, []int)

func (*Empty) ProtoMessage 

func (*Empty) ProtoMessage()

func (*Empty) Reset 

func (m *Empty) Reset()

func (*Empty) String 

func (m *Empty) String() string

type FromBytes 

type FromBytes struct {
	Bytes []byte `protobuf:"bytes,1,opt,name=bytes,proto3" json:"bytes,omitempty"`
}

func (*FromBytes) Descriptor 

func (*FromBytes) Descriptor() ([]byte, []int)

func (*FromBytes) GetBytes 

func (m *FromBytes) GetBytes() []byte

func (*FromBytes) ProtoMessage 

func (*FromBytes) ProtoMessage()

func (*FromBytes) Reset 

func (m *FromBytes) Reset()

func (*FromBytes) String 

func (m *FromBytes) String() string

type FromHostFile 

type FromHostFile struct {
	Filename string `protobuf:"bytes,1,opt,name=filename" json:"filename,omitempty"`
}

func (*FromHostFile) Descriptor 

func (*FromHostFile) Descriptor() ([]byte, []int)

func (*FromHostFile) GetFilename 

func (m *FromHostFile) GetFilename() string

func (*FromHostFile) ProtoMessage 

func (*FromHostFile) ProtoMessage()

func (*FromHostFile) Reset 

func (m *FromHostFile) Reset()

func (*FromHostFile) String 

func (m *FromHostFile) String() string

type GrpcCall 

type GrpcCall struct {
	// Fully qualified rpc call name
	Method string       `protobuf:"bytes,1,opt,name=method" json:"method,omitempty"`
	Args   *GrpcMessage `protobuf:"bytes,2,opt,name=args" json:"args,omitempty"`
	Reply  *GrpcMessage `protobuf:"bytes,3,opt,name=reply" json:"reply,omitempty"`
}

func (*GrpcCall) Descriptor 

func (*GrpcCall) Descriptor() ([]byte, []int)

func (*GrpcCall) GetArgs 

func (m *GrpcCall) GetArgs() *GrpcMessage

func (*GrpcCall) GetMethod 

func (m *GrpcCall) GetMethod() string

func (*GrpcCall) GetReply 

func (m *GrpcCall) GetReply() *GrpcMessage

func (*GrpcCall) ProtoMessage 

func (*GrpcCall) ProtoMessage()

func (*GrpcCall) Reset 

func (m *GrpcCall) Reset()

func (*GrpcCall) String 

func (m *GrpcCall) String() string

type GrpcMessage 

type GrpcMessage struct {
	// Fully qualified message name
	Name string `protobuf:"bytes,1,opt,name=name" json:"name,omitempty"`
	// Protobuf data
	Data []byte `protobuf:"bytes,2,opt,name=data,proto3" json:"data,omitempty"`
}

func (*GrpcMessage) Descriptor 

func (*GrpcMessage) Descriptor() ([]byte, []int)

func (*GrpcMessage) GetData 

func (m *GrpcMessage) GetData() []byte

func (*GrpcMessage) GetName 

func (m *GrpcMessage) GetName() string

func (*GrpcMessage) ProtoMessage 

func (*GrpcMessage) ProtoMessage()

func (*GrpcMessage) Reset 

func (m *GrpcMessage) Reset()

func (*GrpcMessage) String 

func (m *GrpcMessage) String() string

type IncubateTask 

type IncubateTask struct {
}

Run incubator

func (*IncubateTask) Descriptor 

func (*IncubateTask) Descriptor() ([]byte, []int)

func (*IncubateTask) ProtoMessage 

func (*IncubateTask) ProtoMessage()

func (*IncubateTask) Reset 

func (m *IncubateTask) Reset()

func (*IncubateTask) String 

func (m *IncubateTask) String() string

type InventoryItem 

type InventoryItem struct {
	// Inventory id
	Id string `protobuf:"bytes,1,opt,name=id" json:"id,omitempty"`
	// Metadata
	Metadata map[string]*google_protobuf.Any `` /* 136-byte string literal not displayed */
	// Time this inventory item was created at
	CreatedAt *google_protobuf1.Timestamp `protobuf:"bytes,3,opt,name=created_at,json=createdAt" json:"created_at,omitempty"`
	// History of this inventory item
	FromItems []*InventoryItem `protobuf:"bytes,4,rep,name=from_items,json=fromItems" json:"from_items,omitempty"`
	// Types that are valid to be assigned to Item:
	//	*InventoryItem_Tipbox
	//	*InventoryItem_Tipwaste
	//	*InventoryItem_Plate
	//	*InventoryItem_DeckPosition
	//	*InventoryItem_Component
	//	*InventoryItem_PlateType
	//	*InventoryItem_None
	Item isInventoryItem_Item `protobuf_oneof:"item"`
}

func (*InventoryItem) Descriptor 

func (*InventoryItem) Descriptor() ([]byte, []int)

func (*InventoryItem) GetComponent 

func (m *InventoryItem) GetComponent() *Component

func (*InventoryItem) GetCreatedAt 

func (m *InventoryItem) GetCreatedAt() *google_protobuf1.Timestamp

func (*InventoryItem) GetDeckPosition 

func (m *InventoryItem) GetDeckPosition() *DeckPosition

func (*InventoryItem) GetFromItems 

func (m *InventoryItem) GetFromItems() []*InventoryItem

func (*InventoryItem) GetId 

func (m *InventoryItem) GetId() string

func (*InventoryItem) GetItem 

func (m *InventoryItem) GetItem() isInventoryItem_Item

func (*InventoryItem) GetMetadata 

func (m *InventoryItem) GetMetadata() map[string]*google_protobuf.Any

func (*InventoryItem) GetNone 

func (m *InventoryItem) GetNone() *None

func (*InventoryItem) GetPlate 

func (m *InventoryItem) GetPlate() *Plate

func (*InventoryItem) GetPlateType 

func (m *InventoryItem) GetPlateType() *PlateType

func (*InventoryItem) GetTipbox 

func (m *InventoryItem) GetTipbox() *Tipbox

func (*InventoryItem) GetTipwaste 

func (m *InventoryItem) GetTipwaste() *Tipwaste

func (*InventoryItem) ProtoMessage 

func (*InventoryItem) ProtoMessage()

func (*InventoryItem) Reset 

func (m *InventoryItem) Reset()

func (*InventoryItem) String 

func (m *InventoryItem) String() string

func (*InventoryItem) XXX_OneofFuncs 

func (*InventoryItem) XXX_OneofFuncs() (func(msg proto.Message, b *proto.Buffer) error, func(msg proto.Message, tag, wire int, b *proto.Buffer) (bool, error), func(msg proto.Message) (n int), []interface{})

XXX_OneofFuncs is for the internal use of the proto package.

type InventoryItem_Component 

type InventoryItem_Component struct {
	Component *Component `protobuf:"bytes,9,opt,name=component,oneof"`
}

type InventoryItem_DeckPosition 

type InventoryItem_DeckPosition struct {
	DeckPosition *DeckPosition `protobuf:"bytes,8,opt,name=deck_position,json=deckPosition,oneof"`
}

type InventoryItem_None 

type InventoryItem_None struct {
	None *None `protobuf:"bytes,11,opt,name=none,oneof"`
}

type InventoryItem_Plate 

type InventoryItem_Plate struct {
	Plate *Plate `protobuf:"bytes,7,opt,name=plate,oneof"`
}

type InventoryItem_PlateType 

type InventoryItem_PlateType struct {
	PlateType *PlateType `protobuf:"bytes,10,opt,name=plate_type,json=plateType,oneof"`
}

type InventoryItem_Tipbox 

type InventoryItem_Tipbox struct {
	Tipbox *Tipbox `protobuf:"bytes,5,opt,name=tipbox,oneof"`
}

type InventoryItem_Tipwaste 

type InventoryItem_Tipwaste struct {
	Tipwaste *Tipwaste `protobuf:"bytes,6,opt,name=tipwaste,oneof"`
}

type ManualRunTask 

type ManualRunTask struct {
}

Manually initiated task

func (*ManualRunTask) Descriptor 

func (*ManualRunTask) Descriptor() ([]byte, []int)

func (*ManualRunTask) ProtoMessage 

func (*ManualRunTask) ProtoMessage()

func (*ManualRunTask) Reset 

func (m *ManualRunTask) Reset()

func (*ManualRunTask) String 

func (m *ManualRunTask) String() string

type Measurement 

type Measurement struct {
	Value float64 `protobuf:"fixed64,1,opt,name=value" json:"value,omitempty"`
	Unit  string  `protobuf:"bytes,2,opt,name=unit" json:"unit,omitempty"`
}

func (*Measurement) Descriptor 

func (*Measurement) Descriptor() ([]byte, []int)

func (*Measurement) GetUnit 

func (m *Measurement) GetUnit() string

func (*Measurement) GetValue 

func (m *Measurement) GetValue() float64

func (*Measurement) MeasurementUnit 

func (a *Measurement) MeasurementUnit() string

func (*Measurement) ProtoMessage 

func (*Measurement) ProtoMessage()

func (*Measurement) Quantity 

func (a *Measurement) Quantity() float64

func (*Measurement) Reset 

func (m *Measurement) Reset()

func (*Measurement) String 

func (m *Measurement) String() string

type MixerConfig 

type MixerConfig struct {
	InputPlates          []*InventoryItem `protobuf:"bytes,1,rep,name=input_plates,json=inputPlates" json:"input_plates,omitempty"`
	OutputPlates         []*InventoryItem `protobuf:"bytes,2,rep,name=output_plates,json=outputPlates" json:"output_plates,omitempty"`
	InputPlateTypes      []string         `protobuf:"bytes,3,rep,name=input_plate_types,json=inputPlateTypes" json:"input_plate_types,omitempty"`
	OutputPlateTypes     []string         `protobuf:"bytes,4,rep,name=output_plate_types,json=outputPlateTypes" json:"output_plate_types,omitempty"`
	TipTypes             []string         `protobuf:"bytes,5,rep,name=tip_types,json=tipTypes" json:"tip_types,omitempty"`
	MaxPlates            int32            `protobuf:"varint,6,opt,name=max_plates,json=maxPlates" json:"max_plates,omitempty"`
	MaxWells             int32            `protobuf:"varint,7,opt,name=max_wells,json=maxWells" json:"max_wells,omitempty"`
	ResidualVolumeWeight float64          `protobuf:"fixed64,8,opt,name=residual_volume_weight,json=residualVolumeWeight" json:"residual_volume_weight,omitempty"`
	// int32 planning_version = 9;
	ModelEvaporation bool `protobuf:"varint,10,opt,name=model_evaporation,json=modelEvaporation" json:"model_evaporation,omitempty"`
	OutputSort       bool `protobuf:"varint,11,opt,name=output_sort,json=outputSort" json:"output_sort,omitempty"`
	// Driver specific options. Semantics are not stable. Will need to be
	// revised when multi device execution is supported.
	DriverSpecificInputPreferences    []string `` /* 149-byte string literal not displayed */
	DriverSpecificOutputPreferences   []string `` /* 152-byte string literal not displayed */
	DriverSpecificTipPreferences      []string `` /* 143-byte string literal not displayed */
	DriverSpecificTipWastePreferences []string `` /* 160-byte string literal not displayed */
	DriverSpecificWashPreferences     []string `` /* 146-byte string literal not displayed */
	PlanningVersion                   string   `protobuf:"bytes,17,opt,name=planning_version,json=planningVersion" json:"planning_version,omitempty"`
	UseDriverTipTracking              bool     `protobuf:"varint,18,opt,name=use_driver_tip_tracking,json=useDriverTipTracking" json:"use_driver_tip_tracking,omitempty"`
}

func (*MixerConfig) Descriptor 

func (*MixerConfig) Descriptor() ([]byte, []int)

func (*MixerConfig) GetDriverSpecificInputPreferences 

func (m *MixerConfig) GetDriverSpecificInputPreferences() []string

func (*MixerConfig) GetDriverSpecificOutputPreferences 

func (m *MixerConfig) GetDriverSpecificOutputPreferences() []string

func (*MixerConfig) GetDriverSpecificTipPreferences 

func (m *MixerConfig) GetDriverSpecificTipPreferences() []string

func (*MixerConfig) GetDriverSpecificTipWastePreferences 

func (m *MixerConfig) GetDriverSpecificTipWastePreferences() []string

func (*MixerConfig) GetDriverSpecificWashPreferences 

func (m *MixerConfig) GetDriverSpecificWashPreferences() []string

func (*MixerConfig) GetInputPlateTypes 

func (m *MixerConfig) GetInputPlateTypes() []string

func (*MixerConfig) GetInputPlates 

func (m *MixerConfig) GetInputPlates() []*InventoryItem

func (*MixerConfig) GetMaxPlates 

func (m *MixerConfig) GetMaxPlates() int32

func (*MixerConfig) GetMaxWells 

func (m *MixerConfig) GetMaxWells() int32

func (*MixerConfig) GetModelEvaporation 

func (m *MixerConfig) GetModelEvaporation() bool

func (*MixerConfig) GetOutputPlateTypes 

func (m *MixerConfig) GetOutputPlateTypes() []string

func (*MixerConfig) GetOutputPlates 

func (m *MixerConfig) GetOutputPlates() []*InventoryItem

func (*MixerConfig) GetOutputSort 

func (m *MixerConfig) GetOutputSort() bool

func (*MixerConfig) GetPlanningVersion 

func (m *MixerConfig) GetPlanningVersion() string

func (*MixerConfig) GetResidualVolumeWeight 

func (m *MixerConfig) GetResidualVolumeWeight() float64

func (*MixerConfig) GetTipTypes 

func (m *MixerConfig) GetTipTypes() []string

func (*MixerConfig) GetUseDriverTipTracking 

func (m *MixerConfig) GetUseDriverTipTracking() bool

func (*MixerConfig) ProtoMessage 

func (*MixerConfig) ProtoMessage()

func (*MixerConfig) Reset 

func (m *MixerConfig) Reset()

func (*MixerConfig) String 

func (m *MixerConfig) String() string

type MixerState 

type MixerState struct {
	Items      []*InventoryItem `protobuf:"bytes,1,rep,name=items" json:"items,omitempty"`
	Placements []*Placement     `protobuf:"bytes,2,rep,name=placements" json:"placements,omitempty"`
}

func (*MixerState) Descriptor 

func (*MixerState) Descriptor() ([]byte, []int)

func (*MixerState) GetItems 

func (m *MixerState) GetItems() []*InventoryItem

func (*MixerState) GetPlacements 

func (m *MixerState) GetPlacements() []*Placement

func (*MixerState) ProtoMessage 

func (*MixerState) ProtoMessage()

func (*MixerState) Reset 

func (m *MixerState) Reset()

func (*MixerState) String 

func (m *MixerState) String() string

type MixerTask 

type MixerTask struct {
	// Setup: input state of device
	Before []*MixerState `protobuf:"bytes,1,rep,name=before" json:"before,omitempty"`
	// Result: output state of device
	After []*MixerState `protobuf:"bytes,2,rep,name=after" json:"after,omitempty"`
	// Low level device calls representing this task
	Calls []*GrpcCall `protobuf:"bytes,3,rep,name=calls" json:"calls,omitempty"`
}

Run mixer

func (*MixerTask) Descriptor 

func (*MixerTask) Descriptor() ([]byte, []int)

func (*MixerTask) GetAfter 

func (m *MixerTask) GetAfter() []*MixerState

func (*MixerTask) GetBefore 

func (m *MixerTask) GetBefore() []*MixerState

func (*MixerTask) GetCalls 

func (m *MixerTask) GetCalls() []*GrpcCall

func (*MixerTask) ProtoMessage 

func (*MixerTask) ProtoMessage()

func (*MixerTask) Reset 

func (m *MixerTask) Reset()

func (*MixerTask) String 

func (m *MixerTask) String() string

type None 

type None struct {
}

func (*None) Descriptor 

func (*None) Descriptor() ([]byte, []int)

func (*None) ProtoMessage 

func (*None) ProtoMessage()

func (*None) Reset 

func (m *None) Reset()

func (*None) String 

func (m *None) String() string

type OrderTask 

type OrderTask struct {
	// Inventory items to order
	InventoryIds []string `protobuf:"bytes,1,rep,name=inventory_ids,json=inventoryIds" json:"inventory_ids,omitempty"`
}

Order inventory items

func (*OrderTask) Descriptor 

func (*OrderTask) Descriptor() ([]byte, []int)

func (*OrderTask) GetInventoryIds 

func (m *OrderTask) GetInventoryIds() []string

func (*OrderTask) ProtoMessage 

func (*OrderTask) ProtoMessage()

func (*OrderTask) Reset 

func (m *OrderTask) Reset()

func (*OrderTask) String 

func (m *OrderTask) String() string

type OrdinalCoord 

type OrdinalCoord struct {
	X int32 `protobuf:"varint,1,opt,name=x" json:"x,omitempty"`
	Y int32 `protobuf:"varint,2,opt,name=y" json:"y,omitempty"`
	Z int32 `protobuf:"varint,3,opt,name=z" json:"z,omitempty"`
}

Zero-indexed coordinate system in ordinal space: ith item in X, Y, Z space. Origin is back, left, bottom (i.e., left-handed)

func (*OrdinalCoord) Descriptor 

func (*OrdinalCoord) Descriptor() ([]byte, []int)

func (*OrdinalCoord) GetX 

func (m *OrdinalCoord) GetX() int32

func (*OrdinalCoord) GetY 

func (m *OrdinalCoord) GetY() int32

func (*OrdinalCoord) GetZ 

func (m *OrdinalCoord) GetZ() int32

func (*OrdinalCoord) ProtoMessage 

func (*OrdinalCoord) ProtoMessage()

func (*OrdinalCoord) Reset 

func (m *OrdinalCoord) Reset()

func (*OrdinalCoord) String 

func (m *OrdinalCoord) String() string

type PhysicalCoord 

type PhysicalCoord struct {
	X *Measurement `protobuf:"bytes,1,opt,name=x" json:"x,omitempty"`
	Y *Measurement `protobuf:"bytes,2,opt,name=y" json:"y,omitempty"`
	Z *Measurement `protobuf:"bytes,3,opt,name=z" json:"z,omitempty"`
}

func (*PhysicalCoord) Descriptor 

func (*PhysicalCoord) Descriptor() ([]byte, []int)

func (*PhysicalCoord) GetX 

func (m *PhysicalCoord) GetX() *Measurement

func (*PhysicalCoord) GetY 

func (m *PhysicalCoord) GetY() *Measurement

func (*PhysicalCoord) GetZ 

func (m *PhysicalCoord) GetZ() *Measurement

func (*PhysicalCoord) ProtoMessage 

func (*PhysicalCoord) ProtoMessage()

func (*PhysicalCoord) Reset 

func (m *PhysicalCoord) Reset()

func (*PhysicalCoord) String 

func (m *PhysicalCoord) String() string

type Placement 

type Placement struct {
	Parent string `protobuf:"bytes,1,opt,name=parent" json:"parent,omitempty"`
	Child  string `protobuf:"bytes,2,opt,name=child" json:"child,omitempty"`
	// Symbolic location of child in coordinate system of parent
	Coord *OrdinalCoord `protobuf:"bytes,3,opt,name=coord" json:"coord,omitempty"`
}

func (*Placement) Descriptor 

func (*Placement) Descriptor() ([]byte, []int)

func (*Placement) GetChild 

func (m *Placement) GetChild() string

func (*Placement) GetCoord 

func (m *Placement) GetCoord() *OrdinalCoord

func (*Placement) GetParent 

func (m *Placement) GetParent() string

func (*Placement) ProtoMessage 

func (*Placement) ProtoMessage()

func (*Placement) Reset 

func (m *Placement) Reset()

func (*Placement) String 

func (m *Placement) String() string

type Plate 

type Plate struct {
	// Plate type
	Type  string  `protobuf:"bytes,1,opt,name=type" json:"type,omitempty"`
	Wells []*Well `protobuf:"bytes,2,rep,name=wells" json:"wells,omitempty"`
}

Plate

func (*Plate) Descriptor 

func (*Plate) Descriptor() ([]byte, []int)

func (*Plate) GetType 

func (m *Plate) GetType() string

func (*Plate) GetWells 

func (m *Plate) GetWells() []*Well

func (*Plate) ProtoMessage 

func (*Plate) ProtoMessage()

func (*Plate) Reset 

func (m *Plate) Reset()

func (*Plate) String 

func (m *Plate) String() string

type PlatePrep 

type PlatePrep struct {
	// Plate to prepare
	PlateId string `protobuf:"bytes,1,opt,name=plate_id,json=plateId" json:"plate_id,omitempty"`
	// If present, restrict prep to given well addresses, e.g., A1, BB2
	SomeWells []*OrdinalCoord `protobuf:"bytes,2,rep,name=some_wells,json=someWells" json:"some_wells,omitempty"`
}

Prepare a plate

func (*PlatePrep) Descriptor 

func (*PlatePrep) Descriptor() ([]byte, []int)

func (*PlatePrep) GetPlateId 

func (m *PlatePrep) GetPlateId() string

func (*PlatePrep) GetSomeWells 

func (m *PlatePrep) GetSomeWells() []*OrdinalCoord

func (*PlatePrep) ProtoMessage 

func (*PlatePrep) ProtoMessage()

func (*PlatePrep) Reset 

func (m *PlatePrep) Reset()

func (*PlatePrep) String 

func (m *PlatePrep) String() string

type PlatePrepTask 

type PlatePrepTask struct {
	// Plates to prepare
	PlatePreps []*PlatePrep `protobuf:"bytes,1,rep,name=plate_preps,json=platePreps" json:"plate_preps,omitempty"`
}

Prepare plates

func (*PlatePrepTask) Descriptor 

func (*PlatePrepTask) Descriptor() ([]byte, []int)

func (*PlatePrepTask) GetPlatePreps 

func (m *PlatePrepTask) GetPlatePreps() []*PlatePrep

func (*PlatePrepTask) ProtoMessage 

func (*PlatePrepTask) ProtoMessage()

func (*PlatePrepTask) Reset 

func (m *PlatePrepTask) Reset()

func (*PlatePrepTask) String 

func (m *PlatePrepTask) String() string

type PlateType 

type PlateType struct {
	// Dimensions of bounding box of plate
	Dim *PhysicalCoord `protobuf:"bytes,1,opt,name=dim" json:"dim,omitempty"`
	// Dimensions of a bounding box of well including well bottom
	WellDim *PhysicalCoord `protobuf:"bytes,2,opt,name=well_dim,json=wellDim" json:"well_dim,omitempty"`
	// Number of wells
	NumWells *OrdinalCoord `protobuf:"bytes,3,opt,name=num_wells,json=numWells" json:"num_wells,omitempty"`
	// Maximum volume of a well
	MaxVolume *Measurement `protobuf:"bytes,4,opt,name=max_volume,json=maxVolume" json:"max_volume,omitempty"`
	// Shape of well in x-y plane
	WellShape string `protobuf:"bytes,5,opt,name=well_shape,json=wellShape" json:"well_shape,omitempty"`
	// Function relating volume of well (uL) to x-y area (mm^2)
	VolumeUlToAreaMm2 *Polynomial `protobuf:"bytes,6,opt,name=volume_ul_to_area_mm2,json=volumeUlToAreaMm2" json:"volume_ul_to_area_mm2,omitempty"`
	// Function relating volume of well (ul) to its z height (mm)
	VolumeUlToHeightMm *Polynomial `protobuf:"bytes,7,opt,name=volume_ul_to_height_mm,json=volumeUlToHeightMm" json:"volume_ul_to_height_mm,omitempty"`
	// Residual volume of a well
	ResidualVolume *Measurement `protobuf:"bytes,8,opt,name=residual_volume,json=residualVolume" json:"residual_volume,omitempty"`
	// Distance between well centers in (x,y) dimension
	WellOffset *PhysicalCoord `protobuf:"bytes,9,opt,name=well_offset,json=wellOffset" json:"well_offset,omitempty"`
	// Distance from origin of plate to bottom, center of first well (including
	// well bottom)
	WellOrigin *PhysicalCoord `protobuf:"bytes,10,opt,name=well_origin,json=wellOrigin" json:"well_origin,omitempty"`
	// Manufacturer
	Mnfr string `protobuf:"bytes,11,opt,name=mnfr" json:"mnfr,omitempty"`
	// Height of well bottom. Deprecated in favor of VolumeUlToAreaMm2 and
	// VolumeUlToHeightMm.
	WellBottomHeight *Measurement `protobuf:"bytes,1000,opt,name=well_bottom_height,json=wellBottomHeight" json:"well_bottom_height,omitempty"`
	// Shape of well bottom. Deprecated in favor of VolumeUlToAreaMm2 and
	// VolumeUlToHeightMm.
	WellBottomShape string `protobuf:"bytes,1001,opt,name=well_bottom_shape,json=wellBottomShape" json:"well_bottom_shape,omitempty"`
}

PlateType describes the properties of a class of plates

func (*PlateType) Descriptor 

func (*PlateType) Descriptor() ([]byte, []int)

func (*PlateType) GetDim 

func (m *PlateType) GetDim() *PhysicalCoord

func (*PlateType) GetMaxVolume 

func (m *PlateType) GetMaxVolume() *Measurement

func (*PlateType) GetMnfr 

func (m *PlateType) GetMnfr() string

func (*PlateType) GetNumWells 

func (m *PlateType) GetNumWells() *OrdinalCoord

func (*PlateType) GetResidualVolume 

func (m *PlateType) GetResidualVolume() *Measurement

func (*PlateType) GetVolumeUlToAreaMm2 

func (m *PlateType) GetVolumeUlToAreaMm2() *Polynomial

func (*PlateType) GetVolumeUlToHeightMm 

func (m *PlateType) GetVolumeUlToHeightMm() *Polynomial

func (*PlateType) GetWellBottomHeight 

func (m *PlateType) GetWellBottomHeight() *Measurement

func (*PlateType) GetWellBottomShape 

func (m *PlateType) GetWellBottomShape() string

func (*PlateType) GetWellDim 

func (m *PlateType) GetWellDim() *PhysicalCoord

func (*PlateType) GetWellOffset 

func (m *PlateType) GetWellOffset() *PhysicalCoord

func (*PlateType) GetWellOrigin 

func (m *PlateType) GetWellOrigin() *PhysicalCoord

func (*PlateType) GetWellShape 

func (m *PlateType) GetWellShape() string

func (*PlateType) ProtoMessage 

func (*PlateType) ProtoMessage()

func (*PlateType) Reset 

func (m *PlateType) Reset()

func (*PlateType) String 

func (m *PlateType) String() string

type Polynomial 

type Polynomial struct {
	// Coefficients of a polynomial: a[0] * x^0 + a[1] * x^1 + ... + a[n] * x^n
	Coefficients []float64 `protobuf:"fixed64,1,rep,packed,name=coefficients" json:"coefficients,omitempty"`
}

func (*Polynomial) Descriptor 

func (*Polynomial) Descriptor() ([]byte, []int)

func (*Polynomial) GetCoefficients 

func (m *Polynomial) GetCoefficients() []float64

func (*Polynomial) ProtoMessage 

func (*Polynomial) ProtoMessage()

func (*Polynomial) Reset 

func (m *Polynomial) Reset()

func (*Polynomial) String 

func (m *Polynomial) String() string

type ProcessAddress 

type ProcessAddress struct {
	Process string `protobuf:"bytes,1,opt,name=process" json:"process,omitempty"`
	Port    string `protobuf:"bytes,2,opt,name=port" json:"port,omitempty"`
}

func (*ProcessAddress) Descriptor 

func (*ProcessAddress) Descriptor() ([]byte, []int)

func (*ProcessAddress) GetPort 

func (m *ProcessAddress) GetPort() string

func (*ProcessAddress) GetProcess 

func (m *ProcessAddress) GetProcess() string

func (*ProcessAddress) ProtoMessage 

func (*ProcessAddress) ProtoMessage()

func (*ProcessAddress) Reset 

func (m *ProcessAddress) Reset()

func (*ProcessAddress) String 

func (m *ProcessAddress) String() string

type State 

type State int32
const (
	// Task created (initial state)
	State_CREATED State = 0
	// Task eligible to run
	State_SCHEDULED State = 1
	// Task waiting on external input to run
	State_WAITING State = 2
	// Task running
	State_RUNNING State = 3
	// Task finished running successfully
	State_SUCCEEDED State = 4
	// Task finished running unsuccessfully
	State_FAILED State = 5
)

func (State) EnumDescriptor 

func (State) EnumDescriptor() ([]byte, []int)

func (State) String 

func (x State) String() string

type Status 

type Status struct {
	State State `protobuf:"varint,1,opt,name=state,enum=org.antha_lang.antha.v1.State" json:"state,omitempty"`
	// Any message associated with the current state
	Message_ string `protobuf:"bytes,2,opt,name=message_,json=message" json:"message_,omitempty"`
}

func (*Status) Descriptor 

func (*Status) Descriptor() ([]byte, []int)

func (*Status) GetMessage_ 

func (m *Status) GetMessage_() string

func (*Status) GetState 

func (m *Status) GetState() State

func (*Status) ProtoMessage 

func (*Status) ProtoMessage()

func (*Status) Reset 

func (m *Status) Reset()

func (*Status) String 

func (m *Status) String() string

type Task 

type Task struct {
	Id string `protobuf:"bytes,1,opt,name=id" json:"id,omitempty"`
	// Short description
	Label string `protobuf:"bytes,2,opt,name=label" json:"label,omitempty"`
	// Long description
	Details string `protobuf:"bytes,3,opt,name=details" json:"details,omitempty"`
	// If device task, the device id
	DeviceId string `protobuf:"bytes,4,opt,name=device_id,json=deviceId" json:"device_id,omitempty"`
	// Time estimate in seconds, 0 if no estimate available
	TimeEstimate float32 `protobuf:"fixed32,5,opt,name=time_estimate,json=timeEstimate" json:"time_estimate,omitempty"`
	// Task ids that must happen before this task
	HappensBefore []string `protobuf:"bytes,6,rep,name=happens_before,json=happensBefore" json:"happens_before,omitempty"`
	// Status of a task
	Status *Status `protobuf:"bytes,7,opt,name=status" json:"status,omitempty"`
	// Tags
	Tags []string `protobuf:"bytes,8,rep,name=tags" json:"tags,omitempty"`
	// Types that are valid to be assigned to Task:
	//	*Task_OrderTask
	//	*Task_DeckLayoutTask
	//	*Task_PlatePrepTask
	//	*Task_DocumentTask
	//	*Task_MixerTask
	//	*Task_ManualRunTask
	//	*Task_IncubateTask
	//	*Task_DataUploadTask
	Task isTask_Task `protobuf_oneof:"task"`
}

func (*Task) Descriptor 

func (*Task) Descriptor() ([]byte, []int)

func (*Task) GetDataUploadTask 

func (m *Task) GetDataUploadTask() *DataUploadTask

func (*Task) GetDeckLayoutTask 

func (m *Task) GetDeckLayoutTask() *DeckLayoutTask

func (*Task) GetDetails 

func (m *Task) GetDetails() string

func (*Task) GetDeviceId 

func (m *Task) GetDeviceId() string

func (*Task) GetDocumentTask 

func (m *Task) GetDocumentTask() *DocumentTask

func (*Task) GetHappensBefore 

func (m *Task) GetHappensBefore() []string

func (*Task) GetId 

func (m *Task) GetId() string

func (*Task) GetIncubateTask 

func (m *Task) GetIncubateTask() *IncubateTask

func (*Task) GetLabel 

func (m *Task) GetLabel() string

func (*Task) GetManualRunTask 

func (m *Task) GetManualRunTask() *ManualRunTask

func (*Task) GetMixerTask 

func (m *Task) GetMixerTask() *MixerTask

func (*Task) GetOrderTask 

func (m *Task) GetOrderTask() *OrderTask

func (*Task) GetPlatePrepTask 

func (m *Task) GetPlatePrepTask() *PlatePrepTask

func (*Task) GetStatus 

func (m *Task) GetStatus() *Status

func (*Task) GetTags 

func (m *Task) GetTags() []string

func (*Task) GetTask 

func (m *Task) GetTask() isTask_Task

func (*Task) GetTimeEstimate 

func (m *Task) GetTimeEstimate() float32

func (*Task) ProtoMessage 

func (*Task) ProtoMessage()

func (*Task) Reset 

func (m *Task) Reset()

func (*Task) String 

func (m *Task) String() string

func (*Task) XXX_OneofFuncs 

func (*Task) XXX_OneofFuncs() (func(msg proto.Message, b *proto.Buffer) error, func(msg proto.Message, tag, wire int, b *proto.Buffer) (bool, error), func(msg proto.Message) (n int), []interface{})

XXX_OneofFuncs is for the internal use of the proto package.

type Task_DataUploadTask 

type Task_DataUploadTask struct {
	DataUploadTask *DataUploadTask `protobuf:"bytes,16,opt,name=data_upload_task,json=dataUploadTask,oneof"`
}

type Task_DeckLayoutTask 

type Task_DeckLayoutTask struct {
	DeckLayoutTask *DeckLayoutTask `protobuf:"bytes,10,opt,name=deck_layout_task,json=deckLayoutTask,oneof"`
}

type Task_DocumentTask 

type Task_DocumentTask struct {
	DocumentTask *DocumentTask `protobuf:"bytes,12,opt,name=document_task,json=documentTask,oneof"`
}

type Task_IncubateTask 

type Task_IncubateTask struct {
	IncubateTask *IncubateTask `protobuf:"bytes,15,opt,name=incubate_task,json=incubateTask,oneof"`
}

type Task_ManualRunTask 

type Task_ManualRunTask struct {
	ManualRunTask *ManualRunTask `protobuf:"bytes,14,opt,name=manual_run_task,json=manualRunTask,oneof"`
}

type Task_MixerTask 

type Task_MixerTask struct {
	MixerTask *MixerTask `protobuf:"bytes,13,opt,name=mixer_task,json=mixerTask,oneof"`
}

type Task_OrderTask 

type Task_OrderTask struct {
	OrderTask *OrderTask `protobuf:"bytes,9,opt,name=order_task,json=orderTask,oneof"`
}

type Task_PlatePrepTask 

type Task_PlatePrepTask struct {
	PlatePrepTask *PlatePrepTask `protobuf:"bytes,11,opt,name=plate_prep_task,json=platePrepTask,oneof"`
}

type Tipbox 

type Tipbox struct {
	// Tipbox type
	Type string `protobuf:"bytes,1,opt,name=type" json:"type,omitempty"`
}

Pipette tips in a box

func (*Tipbox) Descriptor 

func (*Tipbox) Descriptor() ([]byte, []int)

func (*Tipbox) GetType 

func (m *Tipbox) GetType() string

func (*Tipbox) ProtoMessage 

func (*Tipbox) ProtoMessage()

func (*Tipbox) Reset 

func (m *Tipbox) Reset()

func (*Tipbox) String 

func (m *Tipbox) String() string

type Tipwaste 

type Tipwaste struct {
	// Tipwaste type
	Type string `protobuf:"bytes,1,opt,name=type" json:"type,omitempty"`
}

Disposal for used pipette tips

func (*Tipwaste) Descriptor 

func (*Tipwaste) Descriptor() ([]byte, []int)

func (*Tipwaste) GetType 

func (m *Tipwaste) GetType() string

func (*Tipwaste) ProtoMessage 

func (*Tipwaste) ProtoMessage()

func (*Tipwaste) Reset 

func (m *Tipwaste) Reset()

func (*Tipwaste) String 

func (m *Tipwaste) String() string

type Well 

type Well struct {
	Position  *OrdinalCoord  `protobuf:"bytes,1,opt,name=position" json:"position,omitempty"`
	Component *InventoryItem `protobuf:"bytes,2,opt,name=component" json:"component,omitempty"`
}

Well in plate

func (*Well) Descriptor 

func (*Well) Descriptor() ([]byte, []int)

func (*Well) GetComponent 

func (m *Well) GetComponent() *InventoryItem

func (*Well) GetPosition 

func (m *Well) GetPosition() *OrdinalCoord

func (*Well) ProtoMessage 

func (*Well) ProtoMessage()

func (*Well) Reset 

func (m *Well) Reset()

func (*Well) String 

func (m *Well) String() string

type Workflow 

type Workflow struct {
	Id          string              `protobuf:"bytes,1,opt,name=id" json:"id,omitempty"`
	Label       string              `protobuf:"bytes,2,opt,name=label" json:"label,omitempty"`
	Description string              `protobuf:"bytes,3,opt,name=description" json:"description,omitempty"`
	Processes   map[string]*Element `` /* 138-byte string literal not displayed */
	Connections []*Connection       `protobuf:"bytes,5,rep,name=connections" json:"connections,omitempty"`
}

func (*Workflow) Descriptor 

func (*Workflow) Descriptor() ([]byte, []int)

func (*Workflow) GetConnections 

func (m *Workflow) GetConnections() []*Connection

func (*Workflow) GetDescription 

func (m *Workflow) GetDescription() string

func (*Workflow) GetId 

func (m *Workflow) GetId() string

func (*Workflow) GetLabel 

func (m *Workflow) GetLabel() string

func (*Workflow) GetProcesses 

func (m *Workflow) GetProcesses() map[string]*Element

func (*Workflow) ProtoMessage 

func (*Workflow) ProtoMessage()

func (*Workflow) Reset 

func (m *Workflow) Reset()

func (*Workflow) String 

func (m *Workflow) String() string

Source Files

View all Source files

Jump to

Keyboard shortcuts

? : This menu
/ : Search site
f or F : Jump to
y or Y : Canonical URL
go.dev uses cookies from Google to deliver and enhance the quality of its services and to analyze traffic. Learn more.