lifesciences

package
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Published: Dec 17, 2024 License: BSD-3-Clause Imports: 18 Imported by: 2

Documentation

Overview

Package lifesciences provides access to the Cloud Life Sciences API.

For product documentation, see: https://cloud.google.com/life-sciences

Library status

These client libraries are officially supported by Google. However, this library is considered complete and is in maintenance mode. This means that we will address critical bugs and security issues but will not add any new features.

When possible, we recommend using our newer [Cloud Client Libraries for Go](https://pkg.go.dev/cloud.google.com/go) that are still actively being worked and iterated on.

Creating a client

Usage example:

import "google.golang.org/api/lifesciences/v2beta"
...
ctx := context.Background()
lifesciencesService, err := lifesciences.NewService(ctx)

In this example, Google Application Default Credentials are used for authentication. For information on how to create and obtain Application Default Credentials, see https://developers.google.com/identity/protocols/application-default-credentials.

Other authentication options

To use an API key for authentication (note: some APIs do not support API keys), use google.golang.org/api/option.WithAPIKey:

lifesciencesService, err := lifesciences.NewService(ctx, option.WithAPIKey("AIza..."))

To use an OAuth token (e.g., a user token obtained via a three-legged OAuth flow, use google.golang.org/api/option.WithTokenSource:

config := &oauth2.Config{...}
// ...
token, err := config.Exchange(ctx, ...)
lifesciencesService, err := lifesciences.NewService(ctx, option.WithTokenSource(config.TokenSource(ctx, token)))

See google.golang.org/api/option.ClientOption for details on options.

Index

Constants

View Source
const (
	// See, edit, configure, and delete your Google Cloud data and see the email
	// address for your Google Account.
	CloudPlatformScope = "https://www.googleapis.com/auth/cloud-platform"
)

OAuth2 scopes used by this API.

Variables

This section is empty.

Functions

This section is empty.

Types

type Accelerator

type Accelerator struct {
	// Count: How many accelerators of this type to attach.
	Count int64 `json:"count,omitempty,string"`
	// Type: The accelerator type string (for example, "nvidia-tesla-t4"). Only
	// NVIDIA GPU accelerators are currently supported. If an NVIDIA GPU is
	// attached, the required runtime libraries will be made available to all
	// containers under `/usr/local/nvidia`. The driver version to install must be
	// specified using the NVIDIA driver version parameter on the virtual machine
	// specification. Note that attaching a GPU increases the worker VM startup
	// time by a few minutes.
	Type string `json:"type,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Count") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Count") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Accelerator: Carries information about an accelerator that can be attached to a VM.

func (Accelerator) MarshalJSON

func (s Accelerator) MarshalJSON() ([]byte, error)

type Action

type Action struct {
	// AlwaysRun: By default, after an action fails, no further actions are run.
	// This flag indicates that this action must be run even if the pipeline has
	// already failed. This is useful for actions that copy output files off of the
	// VM or for debugging. Note that no actions will be run if image prefetching
	// fails.
	AlwaysRun bool `json:"alwaysRun,omitempty"`
	// BlockExternalNetwork: Prevents the container from accessing the external
	// network.
	BlockExternalNetwork bool `json:"blockExternalNetwork,omitempty"`
	// Commands: If specified, overrides the `CMD` specified in the container. If
	// the container also has an `ENTRYPOINT` the values are used as entrypoint
	// arguments. Otherwise, they are used as a command and arguments to run inside
	// the container.
	Commands []string `json:"commands,omitempty"`
	// ContainerName: An optional name for the container. The container hostname
	// will be set to this name, making it useful for inter-container
	// communication. The name must contain only upper and lowercase alphanumeric
	// characters and hyphens and cannot start with a hyphen.
	ContainerName string `json:"containerName,omitempty"`
	// Credentials: If the specified image is hosted on a private registry other
	// than Google Container Registry, the credentials required to pull the image
	// must be specified here as an encrypted secret. The secret must decrypt to a
	// JSON-encoded dictionary containing both `username` and `password` keys.
	Credentials *Secret `json:"credentials,omitempty"`
	// DisableImagePrefetch: All container images are typically downloaded before
	// any actions are executed. This helps prevent typos in URIs or issues like
	// lack of disk space from wasting large amounts of compute resources. If set,
	// this flag prevents the worker from downloading the image until just before
	// the action is executed.
	DisableImagePrefetch bool `json:"disableImagePrefetch,omitempty"`
	// DisableStandardErrorCapture: A small portion of the container's standard
	// error stream is typically captured and returned inside the
	// `ContainerStoppedEvent`. Setting this flag disables this functionality.
	DisableStandardErrorCapture bool `json:"disableStandardErrorCapture,omitempty"`
	// EnableFuse: Enable access to the FUSE device for this action. Filesystems
	// can then be mounted into disks shared with other actions. The other actions
	// do not need the `enable_fuse` flag to access the mounted filesystem. This
	// has the effect of causing the container to be executed with `CAP_SYS_ADMIN`
	// and exposes `/dev/fuse` to the container, so use it only for containers you
	// trust.
	EnableFuse bool `json:"enableFuse,omitempty"`
	// EncryptedEnvironment: The encrypted environment to pass into the container.
	// This environment is merged with values specified in the
	// google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate
	// values. The secret must decrypt to a JSON-encoded dictionary where key-value
	// pairs serve as environment variable names and their values. The decoded
	// environment variables can overwrite the values specified by the
	// `environment` field.
	EncryptedEnvironment *Secret `json:"encryptedEnvironment,omitempty"`
	// Entrypoint: If specified, overrides the `ENTRYPOINT` specified in the
	// container.
	Entrypoint string `json:"entrypoint,omitempty"`
	// Environment: The environment to pass into the container. This environment is
	// merged with values specified in the
	// google.cloud.lifesciences.v2beta.Pipeline message, overwriting any duplicate
	// values. In addition to the values passed here, a few other values are
	// automatically injected into the environment. These cannot be hidden or
	// overwritten. `GOOGLE_PIPELINE_FAILED` will be set to "1" if the pipeline
	// failed because an action has exited with a non-zero status (and did not have
	// the `IGNORE_EXIT_STATUS` flag set). This can be used to determine if
	// additional debug or logging actions should execute.
	// `GOOGLE_LAST_EXIT_STATUS` will be set to the exit status of the last
	// non-background action that executed. This can be used by workflow engine
	// authors to determine whether an individual action has succeeded or failed.
	Environment map[string]string `json:"environment,omitempty"`
	// IgnoreExitStatus: Normally, a non-zero exit status causes the pipeline to
	// fail. This flag allows execution of other actions to continue instead.
	IgnoreExitStatus bool `json:"ignoreExitStatus,omitempty"`
	// ImageUri: Required. The URI to pull the container image from. Note that all
	// images referenced by actions in the pipeline are pulled before the first
	// action runs. If multiple actions reference the same image, it is only pulled
	// once, ensuring that the same image is used for all actions in a single
	// pipeline. The image URI can be either a complete host and image
	// specification (e.g., quay.io/biocontainers/samtools), a library and image
	// name (e.g., google/cloud-sdk) or a bare image name ('bash') to pull from the
	// default library. No schema is required in any of these cases. If the
	// specified image is not public, the service account specified for the Virtual
	// Machine must have access to pull the images from GCR, or appropriate
	// credentials must be specified in the
	// google.cloud.lifesciences.v2beta.Action.credentials field.
	ImageUri string `json:"imageUri,omitempty"`
	// Labels: Labels to associate with the action. This field is provided to
	// assist workflow engine authors in identifying actions (for example, to
	// indicate what sort of action they perform, such as localization or
	// debugging). They are returned in the operation metadata, but are otherwise
	// ignored.
	Labels map[string]string `json:"labels,omitempty"`
	// Mounts: A list of mounts to make available to the action. In addition to the
	// values specified here, every action has a special virtual disk mounted under
	// `/google` that contains log files and other operational components. -
	// /google/logs All logs written during the pipeline execution. -
	// /google/logs/output The combined standard output and standard error of all
	// actions run as part of the pipeline execution. -
	// /google/logs/action/*/stdout The complete contents of each individual
	// action's standard output. - /google/logs/action/*/stderr The complete
	// contents of each individual action's standard error output.
	Mounts []*Mount `json:"mounts,omitempty"`
	// PidNamespace: An optional identifier for a PID namespace to run the action
	// inside. Multiple actions should use the same string to share a namespace. If
	// unspecified, a separate isolated namespace is used.
	PidNamespace string `json:"pidNamespace,omitempty"`
	// PortMappings: A map of containers to host port mappings for this container.
	// If the container already specifies exposed ports, use the
	// `PUBLISH_EXPOSED_PORTS` flag instead. The host port number must be less than
	// 65536. If it is zero, an unused random port is assigned. To determine the
	// resulting port number, consult the `ContainerStartedEvent` in the operation
	// metadata.
	PortMappings map[string]int64 `json:"portMappings,omitempty"`
	// PublishExposedPorts: Exposes all ports specified by `EXPOSE` statements in
	// the container. To discover the host side port numbers, consult the
	// `ACTION_STARTED` event in the operation metadata.
	PublishExposedPorts bool `json:"publishExposedPorts,omitempty"`
	// RunInBackground: This flag allows an action to continue running in the
	// background while executing subsequent actions. This is useful to provide
	// services to other actions (or to provide debugging support tools like SSH
	// servers).
	RunInBackground bool `json:"runInBackground,omitempty"`
	// Timeout: The maximum amount of time to give the action to complete. If the
	// action fails to complete before the timeout, it will be terminated and the
	// exit status will be non-zero. The pipeline will continue or terminate based
	// on the rules defined by the `ALWAYS_RUN` and `IGNORE_EXIT_STATUS` flags.
	Timeout string `json:"timeout,omitempty"`
	// ForceSendFields is a list of field names (e.g. "AlwaysRun") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "AlwaysRun") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Action: Specifies a single action that runs a Docker container.

func (Action) MarshalJSON

func (s Action) MarshalJSON() ([]byte, error)

type CancelOperationRequest

type CancelOperationRequest struct {
}

CancelOperationRequest: The request message for Operations.CancelOperation.

type ContainerKilledEvent

type ContainerKilledEvent struct {
	// ActionId: The numeric ID of the action that started the container.
	ActionId int64 `json:"actionId,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ActionId") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ActionId") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ContainerKilledEvent: An event generated when a container is forcibly terminated by the worker. Currently, this only occurs when the container outlives the timeout specified by the user.

func (ContainerKilledEvent) MarshalJSON

func (s ContainerKilledEvent) MarshalJSON() ([]byte, error)

type ContainerStartedEvent

type ContainerStartedEvent struct {
	// ActionId: The numeric ID of the action that started this container.
	ActionId int64 `json:"actionId,omitempty"`
	// IpAddress: The public IP address that can be used to connect to the
	// container. This field is only populated when at least one port mapping is
	// present. If the instance was created with a private address, this field will
	// be empty even if port mappings exist.
	IpAddress string `json:"ipAddress,omitempty"`
	// PortMappings: The container-to-host port mappings installed for this
	// container. This set will contain any ports exposed using the
	// `PUBLISH_EXPOSED_PORTS` flag as well as any specified in the `Action`
	// definition.
	PortMappings map[string]int64 `json:"portMappings,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ActionId") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ActionId") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ContainerStartedEvent: An event generated when a container starts.

func (ContainerStartedEvent) MarshalJSON

func (s ContainerStartedEvent) MarshalJSON() ([]byte, error)

type ContainerStoppedEvent

type ContainerStoppedEvent struct {
	// ActionId: The numeric ID of the action that started this container.
	ActionId int64 `json:"actionId,omitempty"`
	// ExitStatus: The exit status of the container.
	ExitStatus int64 `json:"exitStatus,omitempty"`
	// Stderr: The tail end of any content written to standard error by the
	// container. If the content emits large amounts of debugging noise or contains
	// sensitive information, you can prevent the content from being printed by
	// setting the `DISABLE_STANDARD_ERROR_CAPTURE` flag. Note that only a small
	// amount of the end of the stream is captured here. The entire stream is
	// stored in the `/google/logs` directory mounted into each action, and can be
	// copied off the machine as described elsewhere.
	Stderr string `json:"stderr,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ActionId") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ActionId") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ContainerStoppedEvent: An event generated when a container exits.

func (ContainerStoppedEvent) MarshalJSON

func (s ContainerStoppedEvent) MarshalJSON() ([]byte, error)

type DelayedEvent

type DelayedEvent struct {
	// Cause: A textual description of the cause of the delay. The string can
	// change without notice because it is often generated by another service (such
	// as Compute Engine).
	Cause string `json:"cause,omitempty"`
	// Metrics: If the delay was caused by a resource shortage, this field lists
	// the Compute Engine metrics that are preventing this operation from running
	// (for example, `CPUS` or `INSTANCES`). If the particular metric is not known,
	// a single `UNKNOWN` metric will be present.
	Metrics []string `json:"metrics,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Cause") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Cause") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

DelayedEvent: An event generated whenever a resource limitation or transient error delays execution of a pipeline that was otherwise ready to run.

func (DelayedEvent) MarshalJSON

func (s DelayedEvent) MarshalJSON() ([]byte, error)

type Disk

type Disk struct {
	// Name: A user-supplied name for the disk. Used when mounting the disk into
	// actions. The name must contain only upper and lowercase alphanumeric
	// characters and hyphens and cannot start with a hyphen.
	Name string `json:"name,omitempty"`
	// SizeGb: The size, in GB, of the disk to attach. If the size is not
	// specified, a default is chosen to ensure reasonable I/O performance. If the
	// disk type is specified as `local-ssd`, multiple local drives are
	// automatically combined to provide the requested size. Note, however, that
	// each physical SSD is 375GB in size, and no more than 8 drives can be
	// attached to a single instance.
	SizeGb int64 `json:"sizeGb,omitempty"`
	// SourceImage: An optional image to put on the disk before attaching it to the
	// VM.
	SourceImage string `json:"sourceImage,omitempty"`
	// Type: The Compute Engine disk type. If unspecified, `pd-standard` is used.
	Type string `json:"type,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Name") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Name") to include in API requests
	// with the JSON null value. By default, fields with empty values are omitted
	// from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Disk: Carries information about a disk that can be attached to a VM. See https://cloud.google.com/compute/docs/disks/performance for more information about disk type, size, and performance considerations. Specify either `Volume` or `Disk`, but not both.

func (Disk) MarshalJSON

func (s Disk) MarshalJSON() ([]byte, error)

type Empty

type Empty struct {
	// ServerResponse contains the HTTP response code and headers from the server.
	googleapi.ServerResponse `json:"-"`
}

Empty: A generic empty message that you can re-use to avoid defining duplicated empty messages in your APIs. A typical example is to use it as the request or the response type of an API method. For instance: service Foo { rpc Bar(google.protobuf.Empty) returns (google.protobuf.Empty); }

type Event

type Event struct {
	// ContainerKilled: See google.cloud.lifesciences.v2beta.ContainerKilledEvent.
	ContainerKilled *ContainerKilledEvent `json:"containerKilled,omitempty"`
	// ContainerStarted: See
	// google.cloud.lifesciences.v2beta.ContainerStartedEvent.
	ContainerStarted *ContainerStartedEvent `json:"containerStarted,omitempty"`
	// ContainerStopped: See
	// google.cloud.lifesciences.v2beta.ContainerStoppedEvent.
	ContainerStopped *ContainerStoppedEvent `json:"containerStopped,omitempty"`
	// Delayed: See google.cloud.lifesciences.v2beta.DelayedEvent.
	Delayed *DelayedEvent `json:"delayed,omitempty"`
	// Description: A human-readable description of the event. Note that these
	// strings can change at any time without notice. Any application logic must
	// use the information in the `details` field.
	Description string `json:"description,omitempty"`
	// Failed: See google.cloud.lifesciences.v2beta.FailedEvent.
	Failed *FailedEvent `json:"failed,omitempty"`
	// PullStarted: See google.cloud.lifesciences.v2beta.PullStartedEvent.
	PullStarted *PullStartedEvent `json:"pullStarted,omitempty"`
	// PullStopped: See google.cloud.lifesciences.v2beta.PullStoppedEvent.
	PullStopped *PullStoppedEvent `json:"pullStopped,omitempty"`
	// Timestamp: The time at which the event occurred.
	Timestamp string `json:"timestamp,omitempty"`
	// UnexpectedExitStatus: See
	// google.cloud.lifesciences.v2beta.UnexpectedExitStatusEvent.
	UnexpectedExitStatus *UnexpectedExitStatusEvent `json:"unexpectedExitStatus,omitempty"`
	// WorkerAssigned: See google.cloud.lifesciences.v2beta.WorkerAssignedEvent.
	WorkerAssigned *WorkerAssignedEvent `json:"workerAssigned,omitempty"`
	// WorkerReleased: See google.cloud.lifesciences.v2beta.WorkerReleasedEvent.
	WorkerReleased *WorkerReleasedEvent `json:"workerReleased,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ContainerKilled") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ContainerKilled") to include in
	// API requests with the JSON null value. By default, fields with empty values
	// are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Event: Carries information about events that occur during pipeline execution.

func (Event) MarshalJSON

func (s Event) MarshalJSON() ([]byte, error)

type ExistingDisk added in v0.33.0

type ExistingDisk struct {
	// Disk: If `disk` contains slashes, the Cloud Life Sciences API assumes that
	// it is a complete URL for the disk. If `disk` does not contain slashes, the
	// Cloud Life Sciences API assumes that the disk is a zonal disk and a URL will
	// be generated of the form `zones//disks/`, where “ is the zone in which the
	// instance is allocated. The disk must be ext4 formatted. If all `Mount`
	// references to this disk have the `read_only` flag set to true, the disk will
	// be attached in `read-only` mode and can be shared with other instances.
	// Otherwise, the disk will be available for writing but cannot be shared.
	Disk string `json:"disk,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Disk") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Disk") to include in API requests
	// with the JSON null value. By default, fields with empty values are omitted
	// from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ExistingDisk: Configuration for an existing disk to be attached to the VM.

func (ExistingDisk) MarshalJSON added in v0.33.0

func (s ExistingDisk) MarshalJSON() ([]byte, error)

type FailedEvent

type FailedEvent struct {
	// Cause: The human-readable description of the cause of the failure.
	Cause string `json:"cause,omitempty"`
	// Code: The Google standard error code that best describes this failure.
	//
	// Possible values:
	//   "OK" - Not an error; returned on success. HTTP Mapping: 200 OK
	//   "CANCELLED" - The operation was cancelled, typically by the caller. HTTP
	// Mapping: 499 Client Closed Request
	//   "UNKNOWN" - Unknown error. For example, this error may be returned when a
	// `Status` value received from another address space belongs to an error space
	// that is not known in this address space. Also errors raised by APIs that do
	// not return enough error information may be converted to this error. HTTP
	// Mapping: 500 Internal Server Error
	//   "INVALID_ARGUMENT" - The client specified an invalid argument. Note that
	// this differs from `FAILED_PRECONDITION`. `INVALID_ARGUMENT` indicates
	// arguments that are problematic regardless of the state of the system (e.g.,
	// a malformed file name). HTTP Mapping: 400 Bad Request
	//   "DEADLINE_EXCEEDED" - The deadline expired before the operation could
	// complete. For operations that change the state of the system, this error may
	// be returned even if the operation has completed successfully. For example, a
	// successful response from a server could have been delayed long enough for
	// the deadline to expire. HTTP Mapping: 504 Gateway Timeout
	//   "NOT_FOUND" - Some requested entity (e.g., file or directory) was not
	// found. Note to server developers: if a request is denied for an entire class
	// of users, such as gradual feature rollout or undocumented allowlist,
	// `NOT_FOUND` may be used. If a request is denied for some users within a
	// class of users, such as user-based access control, `PERMISSION_DENIED` must
	// be used. HTTP Mapping: 404 Not Found
	//   "ALREADY_EXISTS" - The entity that a client attempted to create (e.g.,
	// file or directory) already exists. HTTP Mapping: 409 Conflict
	//   "PERMISSION_DENIED" - The caller does not have permission to execute the
	// specified operation. `PERMISSION_DENIED` must not be used for rejections
	// caused by exhausting some resource (use `RESOURCE_EXHAUSTED` instead for
	// those errors). `PERMISSION_DENIED` must not be used if the caller can not be
	// identified (use `UNAUTHENTICATED` instead for those errors). This error code
	// does not imply the request is valid or the requested entity exists or
	// satisfies other pre-conditions. HTTP Mapping: 403 Forbidden
	//   "UNAUTHENTICATED" - The request does not have valid authentication
	// credentials for the operation. HTTP Mapping: 401 Unauthorized
	//   "RESOURCE_EXHAUSTED" - Some resource has been exhausted, perhaps a
	// per-user quota, or perhaps the entire file system is out of space. HTTP
	// Mapping: 429 Too Many Requests
	//   "FAILED_PRECONDITION" - The operation was rejected because the system is
	// not in a state required for the operation's execution. For example, the
	// directory to be deleted is non-empty, an rmdir operation is applied to a
	// non-directory, etc. Service implementors can use the following guidelines to
	// decide between `FAILED_PRECONDITION`, `ABORTED`, and `UNAVAILABLE`: (a) Use
	// `UNAVAILABLE` if the client can retry just the failing call. (b) Use
	// `ABORTED` if the client should retry at a higher level. For example, when a
	// client-specified test-and-set fails, indicating the client should restart a
	// read-modify-write sequence. (c) Use `FAILED_PRECONDITION` if the client
	// should not retry until the system state has been explicitly fixed. For
	// example, if an "rmdir" fails because the directory is non-empty,
	// `FAILED_PRECONDITION` should be returned since the client should not retry
	// unless the files are deleted from the directory. HTTP Mapping: 400 Bad
	// Request
	//   "ABORTED" - The operation was aborted, typically due to a concurrency
	// issue such as a sequencer check failure or transaction abort. See the
	// guidelines above for deciding between `FAILED_PRECONDITION`, `ABORTED`, and
	// `UNAVAILABLE`. HTTP Mapping: 409 Conflict
	//   "OUT_OF_RANGE" - The operation was attempted past the valid range. E.g.,
	// seeking or reading past end-of-file. Unlike `INVALID_ARGUMENT`, this error
	// indicates a problem that may be fixed if the system state changes. For
	// example, a 32-bit file system will generate `INVALID_ARGUMENT` if asked to
	// read at an offset that is not in the range [0,2^32-1], but it will generate
	// `OUT_OF_RANGE` if asked to read from an offset past the current file size.
	// There is a fair bit of overlap between `FAILED_PRECONDITION` and
	// `OUT_OF_RANGE`. We recommend using `OUT_OF_RANGE` (the more specific error)
	// when it applies so that callers who are iterating through a space can easily
	// look for an `OUT_OF_RANGE` error to detect when they are done. HTTP Mapping:
	// 400 Bad Request
	//   "UNIMPLEMENTED" - The operation is not implemented or is not
	// supported/enabled in this service. HTTP Mapping: 501 Not Implemented
	//   "INTERNAL" - Internal errors. This means that some invariants expected by
	// the underlying system have been broken. This error code is reserved for
	// serious errors. HTTP Mapping: 500 Internal Server Error
	//   "UNAVAILABLE" - The service is currently unavailable. This is most likely
	// a transient condition, which can be corrected by retrying with a backoff.
	// Note that it is not always safe to retry non-idempotent operations. See the
	// guidelines above for deciding between `FAILED_PRECONDITION`, `ABORTED`, and
	// `UNAVAILABLE`. HTTP Mapping: 503 Service Unavailable
	//   "DATA_LOSS" - Unrecoverable data loss or corruption. HTTP Mapping: 500
	// Internal Server Error
	Code string `json:"code,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Cause") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Cause") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

FailedEvent: An event generated when the execution of a pipeline has failed. Note that other events can continue to occur after this event.

func (FailedEvent) MarshalJSON

func (s FailedEvent) MarshalJSON() ([]byte, error)

type ListLocationsResponse

type ListLocationsResponse struct {
	// Locations: A list of locations that matches the specified filter in the
	// request.
	Locations []*Location `json:"locations,omitempty"`
	// NextPageToken: The standard List next-page token.
	NextPageToken string `json:"nextPageToken,omitempty"`

	// ServerResponse contains the HTTP response code and headers from the server.
	googleapi.ServerResponse `json:"-"`
	// ForceSendFields is a list of field names (e.g. "Locations") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Locations") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ListLocationsResponse: The response message for Locations.ListLocations.

func (ListLocationsResponse) MarshalJSON

func (s ListLocationsResponse) MarshalJSON() ([]byte, error)

type ListOperationsResponse

type ListOperationsResponse struct {
	// NextPageToken: The standard List next-page token.
	NextPageToken string `json:"nextPageToken,omitempty"`
	// Operations: A list of operations that matches the specified filter in the
	// request.
	Operations []*Operation `json:"operations,omitempty"`

	// ServerResponse contains the HTTP response code and headers from the server.
	googleapi.ServerResponse `json:"-"`
	// ForceSendFields is a list of field names (e.g. "NextPageToken") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "NextPageToken") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ListOperationsResponse: The response message for Operations.ListOperations.

func (ListOperationsResponse) MarshalJSON

func (s ListOperationsResponse) MarshalJSON() ([]byte, error)

type Location

type Location struct {
	// DisplayName: The friendly name for this location, typically a nearby city
	// name. For example, "Tokyo".
	DisplayName string `json:"displayName,omitempty"`
	// Labels: Cross-service attributes for the location. For example
	// {"cloud.googleapis.com/region": "us-east1"}
	Labels map[string]string `json:"labels,omitempty"`
	// LocationId: The canonical id for this location. For example: "us-east1".
	LocationId string `json:"locationId,omitempty"`
	// Metadata: Service-specific metadata. For example the available capacity at
	// the given location.
	Metadata googleapi.RawMessage `json:"metadata,omitempty"`
	// Name: Resource name for the location, which may vary between
	// implementations. For example:
	// "projects/example-project/locations/us-east1"
	Name string `json:"name,omitempty"`

	// ServerResponse contains the HTTP response code and headers from the server.
	googleapi.ServerResponse `json:"-"`
	// ForceSendFields is a list of field names (e.g. "DisplayName") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "DisplayName") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Location: A resource that represents a Google Cloud location.

func (Location) MarshalJSON

func (s Location) MarshalJSON() ([]byte, error)

type Metadata

type Metadata struct {
	// CreateTime: The time at which the operation was created by the API.
	CreateTime string `json:"createTime,omitempty"`
	// EndTime: The time at which execution was completed and resources were
	// cleaned up.
	EndTime string `json:"endTime,omitempty"`
	// Events: The list of events that have happened so far during the execution of
	// this operation.
	Events []*Event `json:"events,omitempty"`
	// Labels: The user-defined labels associated with this operation.
	Labels map[string]string `json:"labels,omitempty"`
	// Pipeline: The pipeline this operation represents.
	Pipeline *Pipeline `json:"pipeline,omitempty"`
	// PubSubTopic: The name of the Cloud Pub/Sub topic where notifications of
	// operation status changes are sent.
	PubSubTopic string `json:"pubSubTopic,omitempty"`
	// StartTime: The first time at which resources were allocated to execute the
	// pipeline.
	StartTime string `json:"startTime,omitempty"`
	// ForceSendFields is a list of field names (e.g. "CreateTime") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "CreateTime") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Metadata: Carries information about the pipeline execution that is returned in the long running operation's metadata field.

func (Metadata) MarshalJSON

func (s Metadata) MarshalJSON() ([]byte, error)

type Mount

type Mount struct {
	// Disk: The name of the disk to mount, as specified in the resources section.
	Disk string `json:"disk,omitempty"`
	// Path: The path to mount the disk inside the container.
	Path string `json:"path,omitempty"`
	// ReadOnly: If true, the disk is mounted read-only inside the container.
	ReadOnly bool `json:"readOnly,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Disk") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Disk") to include in API requests
	// with the JSON null value. By default, fields with empty values are omitted
	// from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Mount: Carries information about a particular disk mount inside a container.

func (Mount) MarshalJSON

func (s Mount) MarshalJSON() ([]byte, error)

type NFSMount added in v0.36.0

type NFSMount struct {
	// Target: A target NFS mount. The target must be specified as
	// `address:/mount".
	Target string `json:"target,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Target") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Target") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

NFSMount: Configuration for an `NFSMount` to be attached to the VM.

func (NFSMount) MarshalJSON added in v0.36.0

func (s NFSMount) MarshalJSON() ([]byte, error)

type Network

type Network struct {
	// Network: The network name to attach the VM's network interface to. The value
	// will be prefixed with `global/networks/` unless it contains a `/`, in which
	// case it is assumed to be a fully specified network resource URL. If
	// unspecified, the global default network is used.
	Network string `json:"network,omitempty"`
	// Subnetwork: If the specified network is configured for custom subnet
	// creation, the name of the subnetwork to attach the instance to must be
	// specified here. The value is prefixed with `regions/*/subnetworks/` unless
	// it contains a `/`, in which case it is assumed to be a fully specified
	// subnetwork resource URL. If the `*` character appears in the value, it is
	// replaced with the region that the virtual machine has been allocated in.
	Subnetwork string `json:"subnetwork,omitempty"`
	// UsePrivateAddress: If set to true, do not attach a public IP address to the
	// VM. Note that without a public IP address, additional configuration is
	// required to allow the VM to access Google services. See
	// https://cloud.google.com/vpc/docs/configure-private-google-access for more
	// information.
	UsePrivateAddress bool `json:"usePrivateAddress,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Network") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Network") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Network: VM networking options.

func (Network) MarshalJSON

func (s Network) MarshalJSON() ([]byte, error)

type Operation

type Operation struct {
	// Done: If the value is `false`, it means the operation is still in progress.
	// If `true`, the operation is completed, and either `error` or `response` is
	// available.
	Done bool `json:"done,omitempty"`
	// Error: The error result of the operation in case of failure or cancellation.
	Error *Status `json:"error,omitempty"`
	// Metadata: An Metadata object. This will always be returned with the
	// Operation.
	Metadata googleapi.RawMessage `json:"metadata,omitempty"`
	// Name: The server-assigned name for the operation. This may be passed to the
	// other operation methods to retrieve information about the operation's
	// status.
	Name string `json:"name,omitempty"`
	// Response: An Empty object.
	Response googleapi.RawMessage `json:"response,omitempty"`

	// ServerResponse contains the HTTP response code and headers from the server.
	googleapi.ServerResponse `json:"-"`
	// ForceSendFields is a list of field names (e.g. "Done") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Done") to include in API requests
	// with the JSON null value. By default, fields with empty values are omitted
	// from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Operation: This resource represents a long-running operation that is the result of a network API call.

func (Operation) MarshalJSON

func (s Operation) MarshalJSON() ([]byte, error)

type PersistentDisk added in v0.33.0

type PersistentDisk struct {
	// SizeGb: The size, in GB, of the disk to attach. If the size is not
	// specified, a default is chosen to ensure reasonable I/O performance. If the
	// disk type is specified as `local-ssd`, multiple local drives are
	// automatically combined to provide the requested size. Note, however, that
	// each physical SSD is 375GB in size, and no more than 8 drives can be
	// attached to a single instance.
	SizeGb int64 `json:"sizeGb,omitempty"`
	// SourceImage: An image to put on the disk before attaching it to the VM.
	SourceImage string `json:"sourceImage,omitempty"`
	// Type: The Compute Engine disk type. If unspecified, `pd-standard` is used.
	Type string `json:"type,omitempty"`
	// ForceSendFields is a list of field names (e.g. "SizeGb") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "SizeGb") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

PersistentDisk: Configuration for a persistent disk to be attached to the VM. See https://cloud.google.com/compute/docs/disks/performance for more information about disk type, size, and performance considerations.

func (PersistentDisk) MarshalJSON added in v0.33.0

func (s PersistentDisk) MarshalJSON() ([]byte, error)

type Pipeline

type Pipeline struct {
	// Actions: The list of actions to execute, in the order they are specified.
	Actions []*Action `json:"actions,omitempty"`
	// EncryptedEnvironment: The encrypted environment to pass into every action.
	// Each action can also specify its own encrypted environment. The secret must
	// decrypt to a JSON-encoded dictionary where key-value pairs serve as
	// environment variable names and their values. The decoded environment
	// variables can overwrite the values specified by the `environment` field.
	EncryptedEnvironment *Secret `json:"encryptedEnvironment,omitempty"`
	// Environment: The environment to pass into every action. Each action can also
	// specify additional environment variables but cannot delete an entry from
	// this map (though they can overwrite it with a different value).
	Environment map[string]string `json:"environment,omitempty"`
	// Resources: The resources required for execution.
	Resources *Resources `json:"resources,omitempty"`
	// Timeout: The maximum amount of time to give the pipeline to complete. This
	// includes the time spent waiting for a worker to be allocated. If the
	// pipeline fails to complete before the timeout, it will be cancelled and the
	// error code will be set to DEADLINE_EXCEEDED. If unspecified, it will default
	// to 7 days.
	Timeout string `json:"timeout,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Actions") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Actions") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Pipeline: Specifies a series of actions to execute, expressed as Docker containers.

func (Pipeline) MarshalJSON

func (s Pipeline) MarshalJSON() ([]byte, error)

type ProjectsLocationsGetCall

type ProjectsLocationsGetCall struct {
	// contains filtered or unexported fields
}

func (*ProjectsLocationsGetCall) Context

Context sets the context to be used in this call's Do method.

func (*ProjectsLocationsGetCall) Do

Do executes the "lifesciences.projects.locations.get" call. Any non-2xx status code is an error. Response headers are in either *Location.ServerResponse.Header or (if a response was returned at all) in error.(*googleapi.Error).Header. Use googleapi.IsNotModified to check whether the returned error was because http.StatusNotModified was returned.

func (*ProjectsLocationsGetCall) Fields

Fields allows partial responses to be retrieved. See https://developers.google.com/gdata/docs/2.0/basics#PartialResponse for more details.

func (*ProjectsLocationsGetCall) Header

func (c *ProjectsLocationsGetCall) Header() http.Header

Header returns a http.Header that can be modified by the caller to add headers to the request.

func (*ProjectsLocationsGetCall) IfNoneMatch

func (c *ProjectsLocationsGetCall) IfNoneMatch(entityTag string) *ProjectsLocationsGetCall

IfNoneMatch sets an optional parameter which makes the operation fail if the object's ETag matches the given value. This is useful for getting updates only after the object has changed since the last request.

type ProjectsLocationsListCall

type ProjectsLocationsListCall struct {
	// contains filtered or unexported fields
}

func (*ProjectsLocationsListCall) Context

Context sets the context to be used in this call's Do method.

func (*ProjectsLocationsListCall) Do

Do executes the "lifesciences.projects.locations.list" call. Any non-2xx status code is an error. Response headers are in either *ListLocationsResponse.ServerResponse.Header or (if a response was returned at all) in error.(*googleapi.Error).Header. Use googleapi.IsNotModified to check whether the returned error was because http.StatusNotModified was returned.

func (*ProjectsLocationsListCall) Fields

Fields allows partial responses to be retrieved. See https://developers.google.com/gdata/docs/2.0/basics#PartialResponse for more details.

func (*ProjectsLocationsListCall) Filter

Filter sets the optional parameter "filter": A filter to narrow down results to a preferred subset. The filtering language accepts strings like "displayName=tokyo", and is documented in more detail in AIP-160 (https://google.aip.dev/160).

func (*ProjectsLocationsListCall) Header

Header returns a http.Header that can be modified by the caller to add headers to the request.

func (*ProjectsLocationsListCall) IfNoneMatch

func (c *ProjectsLocationsListCall) IfNoneMatch(entityTag string) *ProjectsLocationsListCall

IfNoneMatch sets an optional parameter which makes the operation fail if the object's ETag matches the given value. This is useful for getting updates only after the object has changed since the last request.

func (*ProjectsLocationsListCall) PageSize

PageSize sets the optional parameter "pageSize": The maximum number of results to return. If not set, the service selects a default.

func (*ProjectsLocationsListCall) PageToken

PageToken sets the optional parameter "pageToken": A page token received from the `next_page_token` field in the response. Send that page token to receive the subsequent page.

func (*ProjectsLocationsListCall) Pages

Pages invokes f for each page of results. A non-nil error returned from f will halt the iteration. The provided context supersedes any context provided to the Context method.

type ProjectsLocationsOperationsCancelCall

type ProjectsLocationsOperationsCancelCall struct {
	// contains filtered or unexported fields
}

func (*ProjectsLocationsOperationsCancelCall) Context

Context sets the context to be used in this call's Do method.

func (*ProjectsLocationsOperationsCancelCall) Do

Do executes the "lifesciences.projects.locations.operations.cancel" call. Any non-2xx status code is an error. Response headers are in either *Empty.ServerResponse.Header or (if a response was returned at all) in error.(*googleapi.Error).Header. Use googleapi.IsNotModified to check whether the returned error was because http.StatusNotModified was returned.

func (*ProjectsLocationsOperationsCancelCall) Fields

Fields allows partial responses to be retrieved. See https://developers.google.com/gdata/docs/2.0/basics#PartialResponse for more details.

func (*ProjectsLocationsOperationsCancelCall) Header

Header returns a http.Header that can be modified by the caller to add headers to the request.

type ProjectsLocationsOperationsGetCall

type ProjectsLocationsOperationsGetCall struct {
	// contains filtered or unexported fields
}

func (*ProjectsLocationsOperationsGetCall) Context

Context sets the context to be used in this call's Do method.

func (*ProjectsLocationsOperationsGetCall) Do

Do executes the "lifesciences.projects.locations.operations.get" call. Any non-2xx status code is an error. Response headers are in either *Operation.ServerResponse.Header or (if a response was returned at all) in error.(*googleapi.Error).Header. Use googleapi.IsNotModified to check whether the returned error was because http.StatusNotModified was returned.

func (*ProjectsLocationsOperationsGetCall) Fields

Fields allows partial responses to be retrieved. See https://developers.google.com/gdata/docs/2.0/basics#PartialResponse for more details.

func (*ProjectsLocationsOperationsGetCall) Header

Header returns a http.Header that can be modified by the caller to add headers to the request.

func (*ProjectsLocationsOperationsGetCall) IfNoneMatch

IfNoneMatch sets an optional parameter which makes the operation fail if the object's ETag matches the given value. This is useful for getting updates only after the object has changed since the last request.

type ProjectsLocationsOperationsListCall

type ProjectsLocationsOperationsListCall struct {
	// contains filtered or unexported fields
}

func (*ProjectsLocationsOperationsListCall) Context

Context sets the context to be used in this call's Do method.

func (*ProjectsLocationsOperationsListCall) Do

Do executes the "lifesciences.projects.locations.operations.list" call. Any non-2xx status code is an error. Response headers are in either *ListOperationsResponse.ServerResponse.Header or (if a response was returned at all) in error.(*googleapi.Error).Header. Use googleapi.IsNotModified to check whether the returned error was because http.StatusNotModified was returned.

func (*ProjectsLocationsOperationsListCall) Fields

Fields allows partial responses to be retrieved. See https://developers.google.com/gdata/docs/2.0/basics#PartialResponse for more details.

func (*ProjectsLocationsOperationsListCall) Filter

Filter sets the optional parameter "filter": A string for filtering Operations. The following filter fields are supported: * createTime: The time this job was created * events: The set of event (names) that have occurred while running the pipeline. The : operator can be used to determine if a particular event has occurred. * error: If the pipeline is running, this value is NULL. Once the pipeline finishes, the value is the standard Google error code. * labels.key or labels."key with space" where key is a label key. * done: If the pipeline is running, this value is false. Once the pipeline finishes, the value is true.

func (*ProjectsLocationsOperationsListCall) Header

Header returns a http.Header that can be modified by the caller to add headers to the request.

func (*ProjectsLocationsOperationsListCall) IfNoneMatch

IfNoneMatch sets an optional parameter which makes the operation fail if the object's ETag matches the given value. This is useful for getting updates only after the object has changed since the last request.

func (*ProjectsLocationsOperationsListCall) PageSize

PageSize sets the optional parameter "pageSize": The maximum number of results to return. The maximum value is 256.

func (*ProjectsLocationsOperationsListCall) PageToken

PageToken sets the optional parameter "pageToken": The standard list page token.

func (*ProjectsLocationsOperationsListCall) Pages

Pages invokes f for each page of results. A non-nil error returned from f will halt the iteration. The provided context supersedes any context provided to the Context method.

type ProjectsLocationsOperationsService

type ProjectsLocationsOperationsService struct {
	// contains filtered or unexported fields
}

func NewProjectsLocationsOperationsService

func NewProjectsLocationsOperationsService(s *Service) *ProjectsLocationsOperationsService

func (*ProjectsLocationsOperationsService) Cancel

Cancel: Starts asynchronous cancellation on a long-running operation. The server makes a best effort to cancel the operation, but success is not guaranteed. Clients may use Operations.GetOperation or Operations.ListOperations to check whether the cancellation succeeded or the operation completed despite cancellation. Authorization requires the following Google IAM (https://cloud.google.com/iam) permission: * `lifesciences.operations.cancel`

- name: The name of the operation resource to be cancelled.

func (*ProjectsLocationsOperationsService) Get

Get: Gets the latest state of a long-running operation. Clients can use this method to poll the operation result at intervals as recommended by the API service. Authorization requires the following Google IAM (https://cloud.google.com/iam) permission: * `lifesciences.operations.get`

- name: The name of the operation resource.

func (*ProjectsLocationsOperationsService) List

List: Lists operations that match the specified filter in the request. Authorization requires the following Google IAM (https://cloud.google.com/iam) permission: * `lifesciences.operations.list`

- name: The name of the operation's parent resource.

type ProjectsLocationsPipelinesRunCall

type ProjectsLocationsPipelinesRunCall struct {
	// contains filtered or unexported fields
}

func (*ProjectsLocationsPipelinesRunCall) Context

Context sets the context to be used in this call's Do method.

func (*ProjectsLocationsPipelinesRunCall) Do

Do executes the "lifesciences.projects.locations.pipelines.run" call. Any non-2xx status code is an error. Response headers are in either *Operation.ServerResponse.Header or (if a response was returned at all) in error.(*googleapi.Error).Header. Use googleapi.IsNotModified to check whether the returned error was because http.StatusNotModified was returned.

func (*ProjectsLocationsPipelinesRunCall) Fields

Fields allows partial responses to be retrieved. See https://developers.google.com/gdata/docs/2.0/basics#PartialResponse for more details.

func (*ProjectsLocationsPipelinesRunCall) Header

Header returns a http.Header that can be modified by the caller to add headers to the request.

type ProjectsLocationsPipelinesService

type ProjectsLocationsPipelinesService struct {
	// contains filtered or unexported fields
}

func NewProjectsLocationsPipelinesService

func NewProjectsLocationsPipelinesService(s *Service) *ProjectsLocationsPipelinesService

func (*ProjectsLocationsPipelinesService) Run

Run: Runs a pipeline. The returned Operation's metadata field will contain a google.cloud.lifesciences.v2beta.Metadata object describing the status of the pipeline execution. The response field will contain a google.cloud.lifesciences.v2beta.RunPipelineResponse object if the pipeline completes successfully. **Note:** Before you can use this method, the *Life Sciences Service Agent* must have access to your project. This is done automatically when the Cloud Life Sciences API is first enabled, but if you delete this permission you must disable and re-enable the API to grant the Life Sciences Service Agent the required permissions. Authorization requires the following Google IAM (https://cloud.google.com/iam/) permission: * `lifesciences.workflows.run`

  • parent: The project and location that this request should be executed against.

type ProjectsLocationsService

type ProjectsLocationsService struct {
	Operations *ProjectsLocationsOperationsService

	Pipelines *ProjectsLocationsPipelinesService
	// contains filtered or unexported fields
}

func NewProjectsLocationsService

func NewProjectsLocationsService(s *Service) *ProjectsLocationsService

func (*ProjectsLocationsService) Get

Get: Gets information about a location.

- name: Resource name for the location.

func (*ProjectsLocationsService) List

List: Lists information about the supported locations for this service.

- name: The resource that owns the locations collection, if applicable.

type ProjectsService

type ProjectsService struct {
	Locations *ProjectsLocationsService
	// contains filtered or unexported fields
}

func NewProjectsService

func NewProjectsService(s *Service) *ProjectsService

type PullStartedEvent

type PullStartedEvent struct {
	// ImageUri: The URI of the image that was pulled.
	ImageUri string `json:"imageUri,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ImageUri") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ImageUri") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

PullStartedEvent: An event generated when the worker starts pulling an image.

func (PullStartedEvent) MarshalJSON

func (s PullStartedEvent) MarshalJSON() ([]byte, error)

type PullStoppedEvent

type PullStoppedEvent struct {
	// ImageUri: The URI of the image that was pulled.
	ImageUri string `json:"imageUri,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ImageUri") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ImageUri") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

PullStoppedEvent: An event generated when the worker stops pulling an image.

func (PullStoppedEvent) MarshalJSON

func (s PullStoppedEvent) MarshalJSON() ([]byte, error)

type Resources

type Resources struct {
	// Regions: The list of regions allowed for VM allocation. If set, the `zones`
	// field must not be set.
	Regions []string `json:"regions,omitempty"`
	// VirtualMachine: The virtual machine specification.
	VirtualMachine *VirtualMachine `json:"virtualMachine,omitempty"`
	// Zones: The list of zones allowed for VM allocation. If set, the `regions`
	// field must not be set.
	Zones []string `json:"zones,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Regions") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Regions") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Resources: The system resources for the pipeline run. At least one zone or region must be specified or the pipeline run will fail.

func (Resources) MarshalJSON

func (s Resources) MarshalJSON() ([]byte, error)

type RunPipelineRequest

type RunPipelineRequest struct {
	// Labels: User-defined labels to associate with the returned operation. These
	// labels are not propagated to any Google Cloud Platform resources used by the
	// operation, and can be modified at any time. To associate labels with
	// resources created while executing the operation, see the appropriate
	// resource message (for example, `VirtualMachine`).
	Labels map[string]string `json:"labels,omitempty"`
	// Pipeline: Required. The description of the pipeline to run.
	Pipeline *Pipeline `json:"pipeline,omitempty"`
	// PubSubTopic: The name of an existing Pub/Sub topic. The server will publish
	// messages to this topic whenever the status of the operation changes. The
	// Life Sciences Service Agent account must have publisher permissions to the
	// specified topic or notifications will not be sent.
	PubSubTopic string `json:"pubSubTopic,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Labels") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Labels") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

RunPipelineRequest: The arguments to the `RunPipeline` method. The requesting user must have the `iam.serviceAccounts.actAs` permission for the Cloud Life Sciences service account or the request will fail.

func (RunPipelineRequest) MarshalJSON

func (s RunPipelineRequest) MarshalJSON() ([]byte, error)

type RunPipelineResponse

type RunPipelineResponse struct {
}

RunPipelineResponse: The response to the RunPipeline method, returned in the operation's result field on success.

type Secret

type Secret struct {
	// CipherText: The value of the cipherText response from the `encrypt` method.
	// This field is intentionally unaudited.
	CipherText string `json:"cipherText,omitempty"`
	// KeyName: The name of the Cloud KMS key that will be used to decrypt the
	// secret value. The VM service account must have the required permissions and
	// authentication scopes to invoke the `decrypt` method on the specified key.
	KeyName string `json:"keyName,omitempty"`
	// ForceSendFields is a list of field names (e.g. "CipherText") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "CipherText") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Secret: Holds encrypted information that is only decrypted and stored in RAM by the worker VM when running the pipeline.

func (Secret) MarshalJSON

func (s Secret) MarshalJSON() ([]byte, error)

type Service

type Service struct {
	BasePath  string // API endpoint base URL
	UserAgent string // optional additional User-Agent fragment

	Projects *ProjectsService
	// contains filtered or unexported fields
}

func New deprecated

func New(client *http.Client) (*Service, error)

New creates a new Service. It uses the provided http.Client for requests.

Deprecated: please use NewService instead. To provide a custom HTTP client, use option.WithHTTPClient. If you are using google.golang.org/api/googleapis/transport.APIKey, use option.WithAPIKey with NewService instead.

func NewService

func NewService(ctx context.Context, opts ...option.ClientOption) (*Service, error)

NewService creates a new Service.

type ServiceAccount

type ServiceAccount struct {
	// Email: Email address of the service account. If not specified, the default
	// Compute Engine service account for the project will be used.
	Email string `json:"email,omitempty"`
	// Scopes: List of scopes to be enabled for this service account on the VM, in
	// addition to the cloud-platform API scope that will be added by default.
	Scopes []string `json:"scopes,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Email") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Email") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

ServiceAccount: Carries information about a Google Cloud service account.

func (ServiceAccount) MarshalJSON

func (s ServiceAccount) MarshalJSON() ([]byte, error)

type Status

type Status struct {
	// Code: The status code, which should be an enum value of google.rpc.Code.
	Code int64 `json:"code,omitempty"`
	// Details: A list of messages that carry the error details. There is a common
	// set of message types for APIs to use.
	Details []googleapi.RawMessage `json:"details,omitempty"`
	// Message: A developer-facing error message, which should be in English. Any
	// user-facing error message should be localized and sent in the
	// google.rpc.Status.details field, or localized by the client.
	Message string `json:"message,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Code") to unconditionally
	// include in API requests. By default, fields with empty or default values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Code") to include in API requests
	// with the JSON null value. By default, fields with empty values are omitted
	// from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Status: The `Status` type defines a logical error model that is suitable for different programming environments, including REST APIs and RPC APIs. It is used by gRPC (https://github.com/grpc). Each `Status` message contains three pieces of data: error code, error message, and error details. You can find out more about this error model and how to work with it in the API Design Guide (https://cloud.google.com/apis/design/errors).

func (Status) MarshalJSON

func (s Status) MarshalJSON() ([]byte, error)

type UnexpectedExitStatusEvent

type UnexpectedExitStatusEvent struct {
	// ActionId: The numeric ID of the action that started the container.
	ActionId int64 `json:"actionId,omitempty"`
	// ExitStatus: The exit status of the container.
	ExitStatus int64 `json:"exitStatus,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ActionId") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ActionId") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

UnexpectedExitStatusEvent: An event generated when the execution of a container results in a non-zero exit status that was not otherwise ignored. Execution will continue, but only actions that are flagged as `ALWAYS_RUN` will be executed. Other actions will be skipped.

func (UnexpectedExitStatusEvent) MarshalJSON

func (s UnexpectedExitStatusEvent) MarshalJSON() ([]byte, error)

type VirtualMachine

type VirtualMachine struct {
	// Accelerators: The list of accelerators to attach to the VM.
	Accelerators []*Accelerator `json:"accelerators,omitempty"`
	// BootDiskSizeGb: The size of the boot disk, in GB. The boot disk must be
	// large enough to accommodate all of the Docker images from each action in the
	// pipeline at the same time. If not specified, a small but reasonable default
	// value is used.
	BootDiskSizeGb int64 `json:"bootDiskSizeGb,omitempty"`
	// BootImage: The host operating system image to use. Currently, only
	// Container-Optimized OS images can be used. The default value is
	// `projects/cos-cloud/global/images/family/cos-stable`, which selects the
	// latest stable release of Container-Optimized OS. This option is provided to
	// allow testing against the beta release of the operating system to ensure
	// that the new version does not interact negatively with production pipelines.
	// To test a pipeline against the beta release of Container-Optimized OS, use
	// the value `projects/cos-cloud/global/images/family/cos-beta`.
	BootImage string `json:"bootImage,omitempty"`
	// CpuPlatform: The CPU platform to request. An instance based on a newer
	// platform can be allocated, but never one with fewer capabilities. The value
	// of this parameter must be a valid Compute Engine CPU platform name (such as
	// "Intel Skylake"). This parameter is only useful for carefully optimized work
	// loads where the CPU platform has a significant impact. For more information
	// about the effect of this parameter, see
	// https://cloud.google.com/compute/docs/instances/specify-min-cpu-platform.
	CpuPlatform string `json:"cpuPlatform,omitempty"`
	// Disks: The list of disks to create and attach to the VM. Specify either the
	// `volumes[]` field or the `disks[]` field, but not both.
	Disks []*Disk `json:"disks,omitempty"`
	// DockerCacheImages: The Compute Engine Disk Images to use as a Docker cache.
	// The disks will be mounted into the Docker folder in a way that the images
	// present in the cache will not need to be pulled. The digests of the cached
	// images must match those of the tags used or the latest version will still be
	// pulled. The root directory of the ext4 image must contain `image` and
	// `overlay2` directories copied from the Docker directory of a VM where the
	// desired Docker images have already been pulled. Any images pulled that are
	// not cached will be stored on the first cache disk instead of the boot disk.
	// Only a single image is supported.
	DockerCacheImages []string `json:"dockerCacheImages,omitempty"`
	// EnableStackdriverMonitoring: Whether Stackdriver monitoring should be
	// enabled on the VM.
	EnableStackdriverMonitoring bool `json:"enableStackdriverMonitoring,omitempty"`
	// Labels: Optional set of labels to apply to the VM and any attached disk
	// resources. These labels must adhere to the name and value restrictions
	// (https://cloud.google.com/compute/docs/labeling-resources) on VM labels
	// imposed by Compute Engine. Labels keys with the prefix 'google-' are
	// reserved for use by Google. Labels applied at creation time to the VM.
	// Applied on a best-effort basis to attached disk resources shortly after VM
	// creation.
	Labels map[string]string `json:"labels,omitempty"`
	// MachineType: Required. The machine type of the virtual machine to create.
	// Must be the short name of a standard machine type (such as "n1-standard-1")
	// or a custom machine type (such as "custom-1-4096", where "1" indicates the
	// number of vCPUs and "4096" indicates the memory in MB). See Creating an
	// instance with a custom machine type
	// (https://cloud.google.com/compute/docs/instances/creating-instance-with-custom-machine-type#create)
	// for more specifications on creating a custom machine type.
	MachineType string `json:"machineType,omitempty"`
	// Network: The VM network configuration.
	Network *Network `json:"network,omitempty"`
	// NvidiaDriverVersion: The NVIDIA driver version to use when attaching an
	// NVIDIA GPU accelerator. The version specified here must be compatible with
	// the GPU libraries contained in the container being executed, and must be one
	// of the drivers hosted in the `nvidia-drivers-us-public` bucket on Google
	// Cloud Storage.
	NvidiaDriverVersion string `json:"nvidiaDriverVersion,omitempty"`
	// Preemptible: If true, allocate a preemptible VM.
	Preemptible bool `json:"preemptible,omitempty"`
	// Reservation: If specified, the VM will only be allocated inside the matching
	// reservation. It will fail if the VM parameters don't match the reservation.
	Reservation string `json:"reservation,omitempty"`
	// ServiceAccount: The service account to install on the VM. This account does
	// not need any permissions other than those required by the pipeline.
	ServiceAccount *ServiceAccount `json:"serviceAccount,omitempty"`
	// Volumes: The list of disks and other storage to create or attach to the VM.
	// Specify either the `volumes[]` field or the `disks[]` field, but not both.
	Volumes []*Volume `json:"volumes,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Accelerators") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Accelerators") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

VirtualMachine: Carries information about a Compute Engine VM resource.

func (VirtualMachine) MarshalJSON

func (s VirtualMachine) MarshalJSON() ([]byte, error)

type Volume added in v0.33.0

type Volume struct {
	// ExistingDisk: Configuration for a existing disk.
	ExistingDisk *ExistingDisk `json:"existingDisk,omitempty"`
	// NfsMount: Configuration for an NFS mount.
	NfsMount *NFSMount `json:"nfsMount,omitempty"`
	// PersistentDisk: Configuration for a persistent disk.
	PersistentDisk *PersistentDisk `json:"persistentDisk,omitempty"`
	// Volume: A user-supplied name for the volume. Used when mounting the volume
	// into `Actions`. The name must contain only upper and lowercase alphanumeric
	// characters and hyphens and cannot start with a hyphen.
	Volume string `json:"volume,omitempty"`
	// ForceSendFields is a list of field names (e.g. "ExistingDisk") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "ExistingDisk") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

Volume: Carries information about storage that can be attached to a VM. Specify either `Volume` or `Disk`, but not both.

func (Volume) MarshalJSON added in v0.33.0

func (s Volume) MarshalJSON() ([]byte, error)

type WorkerAssignedEvent

type WorkerAssignedEvent struct {
	// Instance: The worker's instance name.
	Instance string `json:"instance,omitempty"`
	// MachineType: The machine type that was assigned for the worker.
	MachineType string `json:"machineType,omitempty"`
	// Zone: The zone the worker is running in.
	Zone string `json:"zone,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Instance") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Instance") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

WorkerAssignedEvent: An event generated after a worker VM has been assigned to run the pipeline.

func (WorkerAssignedEvent) MarshalJSON

func (s WorkerAssignedEvent) MarshalJSON() ([]byte, error)

type WorkerReleasedEvent

type WorkerReleasedEvent struct {
	// Instance: The worker's instance name.
	Instance string `json:"instance,omitempty"`
	// Zone: The zone the worker was running in.
	Zone string `json:"zone,omitempty"`
	// ForceSendFields is a list of field names (e.g. "Instance") to
	// unconditionally include in API requests. By default, fields with empty or
	// default values are omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-ForceSendFields for more
	// details.
	ForceSendFields []string `json:"-"`
	// NullFields is a list of field names (e.g. "Instance") to include in API
	// requests with the JSON null value. By default, fields with empty values are
	// omitted from API requests. See
	// https://pkg.go.dev/google.golang.org/api#hdr-NullFields for more details.
	NullFields []string `json:"-"`
}

WorkerReleasedEvent: An event generated when the worker VM that was assigned to the pipeline has been released (deleted).

func (WorkerReleasedEvent) MarshalJSON

func (s WorkerReleasedEvent) MarshalJSON() ([]byte, error)

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