readprocessor

Documentation

Index

• func FuzzyMatch(before, after, read string) ([2]int8, error)
• type ReadHolder
• type Slice
• type Trios
  • func ProcessRead(readInfo *ReadHolder) (Trios, error)

Functions

func FuzzyMatch

func FuzzyMatch(before, after, read string) ([2]int8, error)

Types

type ReadHolder

type ReadHolder struct {
	Seq1 string
	Seq2 string
}

struct for input reads

type Slice

type Slice struct {
	X int
	Y int
}

Slice struct to hold the slice

type Trios

type Trios struct {
	CellBC string
	Umi    string
	TBC    string
}

Output struct for processed reads

func ProcessRead

func ProcessRead(readInfo *ReadHolder) (Trios, error)