README
¶
bio - a lightweight and high-performance bioinformatics package for Golang
See sub packages for details.
Install
go get -u github.com/shenwei356/bio
Support
Please open an issue to report bugs, propose new functions or ask for help.
License
Copyright (c) 2013-2021, Wei Shen (shenwei356@gmail.com)
Directories
¶
| Path | Synopsis |
|---|---|
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featio
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_bed
Package bed is used to read bed features.
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Package bed is used to read bed features. |
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gtf
Package gtf is used to read gtf features.
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Package gtf is used to read gtf features. |
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Package seq defines a *Seq* type, and provides some basic operations of sequence, like validation of DNA/RNA/Protein sequence and getting reverse complement sequence.
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Package seq defines a *Seq* type, and provides some basic operations of sequence, like validation of DNA/RNA/Protein sequence and getting reverse complement sequence. |
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seqio
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fai
Package fai implements fasta sequence file index handling, including creating , reading and random accessing.
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Package fai implements fasta sequence file index handling, including creating , reading and random accessing. |
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fastx
Package fastx seamlessly parses FASTA and FASTQ format file This package seamlessly parses both FASTA and FASTQ formats.
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Package fastx seamlessly parses FASTA and FASTQ format file This package seamlessly parses both FASTA and FASTQ formats. |
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