indexed

README

indexed

self indexed file reader

hic file, bigwig file, bigbed file

Documentation

Index

• Constants
• Variables
• func Magic(uri string) (string, error)
• func MagicReadSeeker(f io.ReadSeeker) (string, error)

Constants

const BIGBED_MAGIC = 0x8789F2EB

const BIGSIZE = 100000000 //100Mb is bigbedLarge

const BIGWIG_MAGIC = 0x888FFC26

const HIC_MAGIC = 0x00434948

const TWOBIT_MAGIC = 0x1A412743

Variables

var GZIP_MAGIC = []byte("\x1f\x8b")

Functions

func Magic

func Magic(uri string) (string, error)

func MagicReadSeeker

func MagicReadSeeker(f io.ReadSeeker) (string, error)