blosum

package

v0.0.0-...-bae6f69 Latest Latest Go to latest Published: Feb 10, 2018 License: GPL-2.0 Imports: 0 Imported by: 0

Details

Valid go.mod file
Redistributable license
Tagged version
Stable version
Learn more about best practices

Repository

github.com/ndaniels/MICA

Links

Open Source Insights

Documentation ¶

Constants ¶

View Source

const Alphabet62 = "ABCDEFGHIKLMNPQRSTVWXYZ"

Variables ¶

View Source

var Matrix62 = [][]int{
	{4.0, -2.0, 0.0, -2.0, -1.0, -2.0, 0.0, -2.0, -1.0, -1.0, -1.0, -1.0, -2.0, -1.0, -1.0, -1.0, 1.0, 0.0, 0.0, -3.0, 0.0, -2.0, -1.0, -4.0},
	{-2.0, 4.0, -3.0, 4.0, 1.0, -3.0, -1.0, 0.0, -3.0, 0.0, -4.0, -3.0, 3.0, -2.0, 0.0, -1.0, 0.0, -1.0, -3.0, -4.0, -1.0, -3.0, 1.0, -4.0},
	{0.0, -3.0, 9.0, -3.0, -4.0, -2.0, -3.0, -3.0, -1.0, -3.0, -1.0, -1.0, -3.0, -3.0, -3.0, -3.0, -1.0, -1.0, -1.0, -2.0, -2.0, -2.0, -3.0, -4.0},
	{-2.0, 4.0, -3.0, 6.0, 2.0, -3.0, -1.0, -1.0, -3.0, -1.0, -4.0, -3.0, 1.0, -1.0, 0.0, -2.0, 0.0, -1.0, -3.0, -4.0, -1.0, -3.0, 1.0, -4.0},
	{-1.0, 1.0, -4.0, 2.0, 5.0, -3.0, -2.0, 0.0, -3.0, 1.0, -3.0, -2.0, 0.0, -1.0, 2.0, 0.0, 0.0, -1.0, -2.0, -3.0, -1.0, -2.0, 4.0, -4.0},
	{-2.0, -3.0, -2.0, -3.0, -3.0, 6.0, -3.0, -1.0, 0.0, -3.0, 0.0, 0.0, -3.0, -4.0, -3.0, -3.0, -2.0, -2.0, -1.0, 1.0, -1.0, 3.0, -3.0, -4.0},
	{0.0, -1.0, -3.0, -1.0, -2.0, -3.0, 6.0, -2.0, -4.0, -2.0, -4.0, -3.0, 0.0, -2.0, -2.0, -2.0, 0.0, -2.0, -3.0, -2.0, -1.0, -3.0, -2.0, -4.0},
	{-2.0, 0.0, -3.0, -1.0, 0.0, -1.0, -2.0, 8.0, -3.0, -1.0, -3.0, -2.0, 1.0, -2.0, 0.0, 0.0, -1.0, -2.0, -3.0, -2.0, -1.0, 2.0, 0.0, -4.0},
	{-1.0, -3.0, -1.0, -3.0, -3.0, 0.0, -4.0, -3.0, 4.0, -3.0, 2.0, 1.0, -3.0, -3.0, -3.0, -3.0, -2.0, -1.0, 3.0, -3.0, -1.0, -1.0, -3.0, -4.0},
	{-1.0, 0.0, -3.0, -1.0, 1.0, -3.0, -2.0, -1.0, -3.0, 5.0, -2.0, -1.0, 0.0, -1.0, 1.0, 2.0, 0.0, -1.0, -2.0, -3.0, -1.0, -2.0, 1.0, -4.0},
	{-1.0, -4.0, -1.0, -4.0, -3.0, 0.0, -4.0, -3.0, 2.0, -2.0, 4.0, 2.0, -3.0, -3.0, -2.0, -2.0, -2.0, -1.0, 1.0, -2.0, -1.0, -1.0, -3.0, -4.0},
	{-1.0, -3.0, -1.0, -3.0, -2.0, 0.0, -3.0, -2.0, 1.0, -1.0, 2.0, 5.0, -2.0, -2.0, 0.0, -1.0, -1.0, -1.0, 1.0, -1.0, -1.0, -1.0, -1.0, -4.0},
	{-2.0, 3.0, -3.0, 1.0, 0.0, -3.0, 0.0, 1.0, -3.0, 0.0, -3.0, -2.0, 6.0, -2.0, 0.0, 0.0, 1.0, 0.0, -3.0, -4.0, -1.0, -2.0, 0.0, -4.0},
	{-1.0, -2.0, -3.0, -1.0, -1.0, -4.0, -2.0, -2.0, -3.0, -1.0, -3.0, -2.0, -2.0, 7.0, -1.0, -2.0, -1.0, -1.0, -2.0, -4.0, -2.0, -3.0, -1.0, -4.0},
	{-1.0, 0.0, -3.0, 0.0, 2.0, -3.0, -2.0, 0.0, -3.0, 1.0, -2.0, 0.0, 0.0, -1.0, 5.0, 1.0, 0.0, -1.0, -2.0, -2.0, -1.0, -1.0, 3.0, -4.0},
	{-1.0, -1.0, -3.0, -2.0, 0.0, -3.0, -2.0, 0.0, -3.0, 2.0, -2.0, -1.0, 0.0, -2.0, 1.0, 5.0, -1.0, -1.0, -3.0, -3.0, -1.0, -2.0, 0.0, -4.0},
	{1.0, 0.0, -1.0, 0.0, 0.0, -2.0, 0.0, -1.0, -2.0, 0.0, -2.0, -1.0, 1.0, -1.0, 0.0, -1.0, 4.0, 1.0, -2.0, -3.0, 0.0, -2.0, 0.0, -4.0},
	{0.0, -1.0, -1.0, -1.0, -1.0, -2.0, -2.0, -2.0, -1.0, -1.0, -1.0, -1.0, 0.0, -1.0, -1.0, -1.0, 1.0, 5.0, 0.0, -2.0, 0.0, -2.0, -1.0, -4.0},
	{0.0, -3.0, -1.0, -3.0, -2.0, -1.0, -3.0, -3.0, 3.0, -2.0, 1.0, 1.0, -3.0, -2.0, -2.0, -3.0, -2.0, 0.0, 4.0, -3.0, -1.0, -1.0, -2.0, -4.0},
	{-3.0, -4.0, -2.0, -4.0, -3.0, 1.0, -2.0, -2.0, -3.0, -3.0, -2.0, -1.0, -4.0, -4.0, -2.0, -3.0, -3.0, -2.0, -3.0, 11.0, -2.0, 2.0, -3.0, -4.0},
	{0.0, -1.0, -2.0, -1.0, -1.0, -1.0, -1.0, -1.0, -1.0, -1.0, -1.0, -1.0, -1.0, -2.0, -1.0, -1.0, 0.0, 0.0, -1.0, -2.0, -1.0, -1.0, -1.0, -4.0},
	{-2.0, -3.0, -2.0, -3.0, -2.0, 3.0, -3.0, 2.0, -1.0, -2.0, -1.0, -1.0, -2.0, -3.0, -1.0, -2.0, -2.0, -2.0, -1.0, 2.0, -1.0, 7.0, -2.0, -4.0},
	{-1.0, 1.0, -3.0, 1.0, 4.0, -3.0, -2.0, 0.0, -3.0, 1.0, -3.0, -1.0, 0.0, -1.0, 3.0, 0.0, 0.0, -1.0, -2.0, -3.0, -1.0, -2.0, 4.0, -4.0},
	{-4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, -4.0, 0.0},
}

Functions ¶

This section is empty.

Types ¶

This section is empty.

Source Files ¶

View all Source files

blosum.go

?	: This menu
/	: Search site
f or F	: Jump to
y or Y	: Canonical URL