mcmodel

package
v1.0.0 Latest Latest
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 Go to latest Published: Oct 1, 2024 License: MIT Imports: 10 Imported by: 1

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Constants

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const (
	ValueTypeUnset          = 0
	ValueTypeInt            = 1
	ValueTypeFloat          = 2
	ValueTypeString         = 3
	ValueTypeComplex        = 4
	ValueTypeArrayOfInt     = 5
	ValueTypeArrayOfFloat   = 6
	ValueTypeArrayOfString  = 7
	ValueTypeArrayOfComplex = 8
)

Variables

This section is empty.

Functions

This section is empty.

Types

type Activity 

type Activity struct {
	ID         int         `json:"id"`
	Name       string      `json:"name"`
	Attributes []Attribute `json:"attributes" gorm:"-"`
}

type Attribute 

type Attribute struct {
	ID               int              `json:"id"`
	UUID             string           `json:"uuid"`
	Name             string           `json:"name"`
	AttributableID   int              `json:"attributable_id"`
	AttributableType string           `json:"attributable_type"`
	AttributeValues  []AttributeValue `json:"attribute_values"`
}

func (Attribute) GetValue 

func (a Attribute) GetValue() interface{}

func (*Attribute) LoadValues 

func (a *Attribute) LoadValues() error

type AttributeValue 

type AttributeValue struct {
	ID                  int                      `json:"id"`
	UUID                string                   `json:"uuid"`
	AttributeID         int                      `json:"attribute_id"`
	Unit                string                   `json:"unit"`
	Val                 string                   `json:"val"`
	ValueType           int                      `json:"value_type" gorm:"-"`
	ValueInt            int64                    `json:"value_int" gorm:"-"`
	ValueFloat          float64                  `json:"value_float" gorm:"-"`
	ValueString         string                   `json:"value_string" gorm:"-"`
	ValueComplex        map[string]interface{}   `gorm:"-"`
	ValueArrayOfInt     []int64                  `gorm:"-"`
	ValueArrayOfFloat   []float64                `gorm:"-"`
	ValueArrayOfString  []string                 `gorm:"-"`
	ValueArrayOfComplex []map[string]interface{} `gorm:"-"`
}

type Conversion 

type Conversion struct {
	ID                  int       `json:"id"`
	UUID                string    `json:"uuid"`
	ProjectID           int       `json:"project_id"`
	OwnerID             int       `json:"owner_id"`
	FileID              int       `json:"file_id"`
	CreatedAt           time.Time `json:"created_at"`
	UpdatedAt           time.Time `json:"updated_at"`
	ConversionStartedAt time.Time `json:"conversion_started_at"`
}

func (Conversion) TableName 

func (Conversion) TableName() string

type Dataset 

type Dataset struct {
	ID            int    `json:"id"`
	Name          string `json:"name"`
	UUID          string `json:"uuid"`
	ProjectID     int    `json:"project_id"`
	License       string `json:"license"`
	LicenseLink   string `json:"license_link"`
	Description   string `json:"description"`
	Summary       string `json:"summary"`
	DOI           string `json:"doi"`
	Authors       string `json:"authors"`
	Files         []File `json:"files" gorm:"many2many:dataset2file"`
	FileSelection string
	CreatedAt     time.Time `json:"created_at"`
	UpdatedAt     time.Time `json:"updated_at"`
	PublishedAt   time.Time `json:"published_at"`
}

func (Dataset) GetEntitiesFromTemplate 

func (d Dataset) GetEntitiesFromTemplate(db *gorm.DB) ([]Entity, error)

func (Dataset) GetFileSelection 

func (d Dataset) GetFileSelection() (*FileSelection, error)

func (Dataset) GetFiles 

func (d Dataset) GetFiles(db *gorm.DB) *gorm.DB

func (Dataset) ZipfileDir 

func (d Dataset) ZipfileDir(mcfsDir string) string

func (Dataset) ZipfilePath 

func (d Dataset) ZipfilePath(mcfsDir string) string

type DirEntry 

type DirEntry struct {
	// contains filtered or unexported fields
}

func (DirEntry) Info 

func (d DirEntry) Info() (fs.FileInfo, error)

func (DirEntry) IsDir 

func (d DirEntry) IsDir() bool

func (DirEntry) Name 

func (d DirEntry) Name() string

func (DirEntry) Type 

func (d DirEntry) Type() fs.FileMode

type Entity 

type Entity struct {
	ID           int           `json:"id"`
	Name         string        `json:"name"`
	Files        []File        `json:"files" gorm:"many2many:entity2file"`
	EntityStates []EntityState `json:"entity_states"`
}

type EntityState 

type EntityState struct {
	ID         int         `json:"id"`
	EntityID   int         `json:"entity_id"`
	Attributes []Attribute `json:"attributes" gorm:"-"`
}

type Experiment 

type Experiment struct {
	ID          int       `json:"id"`
	UUID        string    `json:"uuid"`
	Name        string    `json:"name"`
	Description string    `json:"description"`
	Summary     string    `json:"summary"`
	OwnerID     int       `json:"owner_id"`
	Owner       *User     `json:"owner" gorm:"foreignKey:OwnerID;references:ID"`
	ProjectID   int       `json:"project_id"`
	Project     *Project  `json:"project" gorm:"foreignKey:ProjectID;references:ID"`
	CreatedAt   time.Time `json:"created_at"`
	UpdatedAt   time.Time `json:"updated_at"`
}

type File 

type File struct {
	ID                   int       `json:"id"`
	UUID                 string    `json:"uuid"`
	UsesUUID             string    `json:"uses_uuid"`
	UsesID               int       `json:"uses_id"`
	ProjectID            int       `json:"project_id"`
	Name                 string    `json:"name"`
	OwnerID              int       `json:"owner_id"`
	Path                 string    `json:"path"`
	DirectoryID          int       `json:"directory_id" gorm:"default:null"`
	DatasetID            int       `json:"dataset_id" gorm:"default:null"`
	Size                 uint64    `json:"size"`
	Checksum             string    `json:"checksum"`
	MimeType             string    `json:"mime_type"`
	MediaTypeDescription string    `json:"media_type_description"`
	Current              bool      `json:"current"`
	Directory            *File     `json:"directory" gorm:"foreignKey:DirectoryID;references:ID"`
	DeletedAt            time.Time `gorm:"default:null"`
	CreatedAt            time.Time `json:"created_at"`
	UpdatedAt            time.Time `json:"updated_at"`
}

func (File) CreateReturningHandleToUnderlyingFile 

func (f File) CreateReturningHandleToUnderlyingFile(mcfsDir string) (*os.File, error)

func (File) CreateUnderlyingFile 

func (f File) CreateUnderlyingFile(mcfsDir string) error

func (File) FullPath 

func (f File) FullPath() string

func (File) IDForUses 

func (f File) IDForUses() int

func (File) IsConvertible 

func (f File) IsConvertible() bool

func (File) IsDir 

func (f File) IsDir() bool

func (File) IsFile 

func (f File) IsFile() bool

func (File) MkdirUnderlyingPath 

func (f File) MkdirUnderlyingPath(mcfsDir string) error

func (File) TableName 

func (File) TableName() string

func (File) ToDirEntry 

func (f File) ToDirEntry() DirEntry

func (File) ToFileInfo 

func (f File) ToFileInfo() FileInfo

func (File) ToUnderlyingDirPath 

func (f File) ToUnderlyingDirPath(mcdir string) string

func (File) ToUnderlyingFilePath 

func (f File) ToUnderlyingFilePath(mcdir string) string

func (File) ToUnderlyingFilePathForUUID 

func (f File) ToUnderlyingFilePathForUUID(mcdir string) string

func (File) UUIDForPath 

func (f File) UUIDForPath() string

func (File) UUIDForUses 

func (f File) UUIDForUses() string

type FileInfo 

type FileInfo struct {
	// contains filtered or unexported fields
}

func (FileInfo) IsDir 

func (f FileInfo) IsDir() bool

func (FileInfo) ModTime 

func (f FileInfo) ModTime() time.Time

func (FileInfo) Mode 

func (f FileInfo) Mode() fs.FileMode

func (FileInfo) Name 

func (f FileInfo) Name() string

func (FileInfo) Size 

func (f FileInfo) Size() int64

func (FileInfo) Sys 

func (f FileInfo) Sys() interface{}

type FileSelection 

type FileSelection struct {
	IncludeFiles []string `json:"include_files"`
	ExcludeFiles []string `json:"exclude_files"`
	IncludeDirs  []string `json:"include_dirs"`
	ExcludeDirs  []string `json:"exclude_dirs"`
}

type GlobusTransfer 

type GlobusTransfer struct {
	ID                                int              `json:"id"`
	UUID                              string           `json:"string"`
	ProjectID                         int              `json:"project_id"`
	Project                           *Project         `gorm:"foreignKey:ProjectID;references:ID"`
	Name                              string           `json:"name"`
	State                             string           `json:"state"`
	OwnerID                           int              `json:"owner_id"`
	Owner                             *User            `gorm:"foreignKey:OwnerID;references:ID"`
	GlobusEndpointID                  string           `json:"globus_endpoint_id"`
	GlobusAclID                       string           `json:"globus_acl_id"`
	GlobusPath                        string           `json:"globus_path"`
	GlobusIdentityID                  string           `json:"globus_identity_id"`
	GlobusURL                         string           `json:"globus_url"`
	LastGlobusTransferIDCompleted     string           `gorm:"column:last_globus_transfer_id_completed" json:"last_globus_transfer_id_completed"`
	LatestGlobusTransferCompletedDate string           `json:"latest_globus_transfer_completed_date"`
	TransferRequestID                 int              `json:"transfer_request_id"`
	TransferRequest                   *TransferRequest `gorm:"foreignKey:TransferRequestID;references:ID"`
	CreatedAt                         time.Time        `json:"created_at"`
	UpdatedAt                         time.Time        `json:"updated_at"`
}

func (GlobusTransfer) TableName 

func (GlobusTransfer) TableName() string

type Project 

type Project struct {
	ID             int       `json:"id"`
	UUID           string    `json:"uuid"`
	Slug           string    `json:"slug"`
	Name           string    `json:"name"`
	Description    string    `json:"description"`
	Summary        string    `json:"summary"`
	TeamID         int       `json:"team_id"`
	OwnerID        int       `json:"owner_id"`
	Owner          *User     `json:"owner" gorm:"foreignKey:OwnerID;references:ID"`
	RootDir        *File     `json:"rootDir"`
	Size           int64     `json:"size"`
	FileCount      int       `json:"file_count"`
	DirectoryCount int       `json:"directory_count"`
	FileTypes      string    `json:"file_types"`
	CreatedAt      time.Time `json:"created_at"`
	UpdatedAt      time.Time `json:"updated_at"`
}

func (Project) GetFileTypes 

func (p Project) GetFileTypes() (map[string]int, error)

func (Project) ToFileTypeAsString 

func (p Project) ToFileTypeAsString(fileTypes map[string]int) (string, error)

type Team 

type Team struct {
	ID        int       `json:"id"`
	UUID      string    `json:"uuid"`
	Name      string    `json:"name"`
	OwnerID   int       `json:"owner_id"`
	Owner     *User     `json:"owner" gorm:"foreignKey:OwnerID;references:ID"`
	Members   []User    `gorm:"many2many:team2member;"`
	Admins    []User    `gorm:"many2many:team2admin"`
	CreatedAt time.Time `json:"created_at"`
	UpdatedAt time.Time `json:"updated_at"`
}

type TransferRequest 

type TransferRequest struct {
	ID             int             `json:"id"`
	UUID           string          `json:"uuid"`
	State          string          `json:"state"`
	ProjectID      int             `json:"project_id"`
	OwnerID        int             `json:"owner_id"`
	Owner          *User           `json:"owner" gorm:"foreignKey:OwnerID;references:ID"`
	GlobusTransfer *GlobusTransfer `json:"globus_transfer" gorm:"foreignKey:transfer_request_id;references:id"`
	LastActiveAt   time.Time       `json:"last_active_at"`
	CreatedAt      time.Time       `json:"created_at"`
	UpdatedAt      time.Time       `json:"updated_at"`
}

func (TransferRequest) Join 

func (tr TransferRequest) Join(paths ...string) string

func (TransferRequest) JoinFromBase 

func (tr TransferRequest) JoinFromBase(base string, paths ...string) string

func (TransferRequest) TableName 

func (TransferRequest) TableName() string

type TransferRequestFile 

type TransferRequestFile struct {
	ID                int              `json:"id"`
	UUID              string           `json:"string"`
	Name              string           `json:"name"`
	State             string           `json:"state"`
	TransferRequestID int              `json:"transfer_request_id"`
	TransferRequest   *TransferRequest `gorm:"foreignKey:TransferRequestID;references:ID"`
	ProjectID         int              `json:"project_id"`
	DirectoryID       int              `json:"directory_id"`
	FileID            int              `json:"file_id"`
	File              *File            `gorm:"foreignKey:FileID;references:ID"`
	OwnerID           int              `json:"owner_id"`
	CreatedAt         time.Time        `json:"created_at"`
	UpdatedAt         time.Time        `json:"updated_at"`
}

func (TransferRequestFile) TableName 

func (TransferRequestFile) TableName() string

type User 

type User struct {
	ID         int    `json:"id"`
	UUID       string `json:"uuid"`
	Slug       string `json:"slug"`
	Name       string `json:"name"`
	Email      string `json:"email"`
	GlobusUser string `json:"globus_user"`
	ApiToken   string `json:"-"`
	Password   string `json:"-"`
	CreatedAt  time.Time
	UpdatedAt  time.Time
}

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