vcf

package

v0.0.1 Latest Latest Go to latest Published: Aug 4, 2020 License: MIT Imports: 9 Imported by: 0

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Repository

github.com/kazmiekr/clinvar-matcher

Links

Open Source Insights

Documentation ¶

Index ¶

type VcfLine
- func ReadVcf(vcfPath string) ([]*VcfLine, error)
- func (vcfLine VcfLine) GetSampleData(key string) string

Constants ¶

This section is empty.

Variables ¶

This section is empty.

Functions ¶

This section is empty.

Types ¶

type VcfLine ¶

type VcfLine struct {
	Chrom      string
	Pos        int
	ID         string
	Ref        string
	Alt        string
	Qual       string
	Filter     string
	Info       map[string]string
	Format     string
	Sample     string
	SampleData map[string]string
}

func ReadVcf ¶

func ReadVcf(vcfPath string) ([]*VcfLine, error)

func (VcfLine) GetSampleData ¶

func (vcfLine VcfLine) GetSampleData(key string) string

Source Files ¶

View all Source files

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