fastareader

Documentation

Overview

Example use of lexbytes

Index

• type Reader
  • func NewReader(f io.ReadCloser) *Reader
  • func NewReaderName(name string) (r *Reader, err error)
  • func (self *Reader) Close() (err error)
  • func (self *Reader) Read() (sequence *seq.Seq, err error)
  • func (self *Reader) Rewind() (err error)

Types

type Reader

type Reader struct {
	// contains filtered or unexported fields
}

Fasta sequence format reader type.

func NewReader

func NewReader(f io.ReadCloser) *Reader

Returns a new fasta format reader using f.

func NewReaderName

func NewReaderName(name string) (r *Reader, err error)

Returns a new fasta format reader using a filename.

func (*Reader) Close

func (self *Reader) Close() (err error)

Close the reader.

func (*Reader) Read

func (self *Reader) Read() (sequence *seq.Seq, err error)

Read a single sequence and return it or an error.

func (*Reader) Rewind

func (self *Reader) Rewind() (err error)

Rewind the reader.