mbdr

module

v0.0.0-...-3d371da Latest Latest Go to latest Published: Aug 21, 2015 License: BSD-3-Clause

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Repository

github.com/haskelladdict/mbdr

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README ¶

mbdr

mbdr is a utility for querying and parsing binary mcell reaction data output files

Directories ¶

Path	Synopsis
cmd
frogAnalyzer frogAnalyzer determines vesicle release events and latencies for our frog NMJ model according to the original excess-calcium-binding-site model (Dittrich et al., Biophys.	frogAnalyzer determines vesicle release events and latencies for our frog NMJ model according to the original excess-calcium-binding-site model (Dittrich et al., Biophys.
frogAnalyzerY frogAnalyzer determines vesicle release events and latencies for our frog NMJ model according to the second sensor facilitation model (see Ma et al., J. Neurophys, 2014)	frogAnalyzer determines vesicle release events and latencies for our frog NMJ model according to the second sensor facilitation model (see Ma et al., J. Neurophys, 2014)
mbdr
mouseAnalyzer mouseAnalyzer determines vesicle release events and latencies for our mouse NMJ 6 AZ model with two synaptic vesicles each according to the the original excess-calcium-binding-site model (Dittrich et al., Biophys.	mouseAnalyzer determines vesicle release events and latencies for our mouse NMJ 6 AZ model with two synaptic vesicles each according to the the original excess-calcium-binding-site model (Dittrich et al., Biophys.
mouseAnalyzerY mouseAnalyzer determines vesicle release events and latencies for our mouse NMJ 6 AZ model with two synaptic vesicles each according to the second sensor faciliation model (see Ma et al., J. Neurophys, 2014)	mouseAnalyzer determines vesicle release events and latencies for our mouse NMJ 6 AZ model with two synaptic vesicles each according to the second sensor faciliation model (see Ma et al., J. Neurophys, 2014)
libmbd Package libmbd contains data structures and helper routines for extracting reaction data from binary mcell reaction data output files	Package libmbd contains data structures and helper routines for extracting reaction data from binary mcell reaction data output files
parser Package parser is a wrapper around the main parsing routines.	Package parser is a wrapper around the main parsing routines.
parseAPI1 Package parseAPI1 contains the infrastructure for parsing MCell binary reaction data output that was written according to API version MCELL_BINARY_API_1.	Package parseAPI1 contains the infrastructure for parsing MCell binary reaction data output that was written according to API version MCELL_BINARY_API_1.
parseAPI2 Package parseAPI2 contains the infrastructure for parsing MCell binary reaction data output that was written according to API version MCELL_BINARY_API_2.	Package parseAPI2 contains the infrastructure for parsing MCell binary reaction data output that was written according to API version MCELL_BINARY_API_2.
util Package util contains low lever helper function for parsing byte buffers	Package util contains low lever helper function for parsing byte buffers
releaser Package releaser determines vesicle release events and latencies for our from and mouse NMJ AZ models.	Package releaser determines vesicle release events and latencies for our from and mouse NMJ AZ models.
version Version provides the version tag for all the mbdr tools	Version provides the version tag for all the mbdr tools

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