jobs

Documentation

Overview

jobs models represent and manipulate jobs within a Galaxy instance Relevant api endpoints are: `/api/jobs`, `/api/job_lock`

Index

• Constants
• type Job
  • func Get(ctx context.Context, g *blend4go.GalaxyInstance, id blend4go.GalaxyID) (*Job, error)
  • func List(ctx context.Context, g *blend4go.GalaxyInstance) ([]*Job, error)
  • func NewJob(ctx context.Context, g *blend4go.GalaxyInstance, ...) ([]*Job, []*histories.HistoryDatasetAssociation, ...)
  • func (j *Job) Delete(ctx context.Context) error
  • func (j *Job) GetBasePath() string
  • func (j *Job) GetID() blend4go.GalaxyID
  • func (j *Job) Resume(ctx context.Context) error
  • func (j *Job) SetGalaxyInstance(g *blend4go.GalaxyInstance)
  • func (j *Job) SetID(id blend4go.GalaxyID)

Constants

const BasePath = "/api/jobs"

Types

type Job

type Job struct {
	Id         blend4go.GalaxyID `json:"id,omitempty"`
	ToolId     string            `json:"tool_id,omitempty"`
	UpdateTime string            `json:"update_time,omitempty"`
	HistoryId  string            `json:"history_id,omitempty"`
	ExitCode   uint              `json:"exit_code,omitempty"`
	State      string            `json:"state,omitempty"`
	CreateTime string            `json:"create_time,omitempty"`
	ModelClass string            `json:"model_class,omitempty"`
	Inputs     interface{}       `json:"inputs,omitempty"`
	Outputs    interface{}       `json:"outputs,omitempty"`
	Params     interface{}       `json:"params,omitempty"`
	// contains filtered or unexported fields
}

func Get

func Get(ctx context.Context, g *blend4go.GalaxyInstance, id blend4go.GalaxyID) (*Job, error)

func List

func List(ctx context.Context, g *blend4go.GalaxyInstance) ([]*Job, error)

func NewJob

func NewJob(ctx context.Context, g *blend4go.GalaxyInstance, payload map[string]interface{}) ([]*Job, []*histories.HistoryDatasetAssociation, []*histories.HistoryDatasetCollectionAssociation, []*histories.HistoryDatasetCollectionAssociation, error)

Execute tool with a given parameter payload

func (*Job) Delete

func (j *Job) Delete(ctx context.Context) error

Delete or stop a job

func (*Job) GetBasePath

func (j *Job) GetBasePath() string

func (*Job) GetID

func (j *Job) GetID() blend4go.GalaxyID

func (*Job) Resume

func (j *Job) Resume(ctx context.Context) error

Resume paused job

func (*Job) SetGalaxyInstance

func (j *Job) SetGalaxyInstance(g *blend4go.GalaxyInstance)

func (*Job) SetID

func (j *Job) SetID(id blend4go.GalaxyID)