utils

Documentation

Index

• func ReadCompTrees(inputfile string, compTrees chan<- tree.Trees) (int, error)
• func ReadRefTree(inputfile string) (*tree.Tree, error)
• func ReadUntilSemiColon(r *bufio.Reader) (string, error)
• func Readln(r *bufio.Reader) (string, error)

Functions

func ReadCompTrees

func ReadCompTrees(inputfile string, compTrees chan<- tree.Trees) (int, error)

Read a bunch of trees from the input file. One line must define One tree. One tree per line

func ReadRefTree

func ReadRefTree(inputfile string) (*tree.Tree, error)

Reads one tree from the input file

func ReadUntilSemiColon

func ReadUntilSemiColon(r *bufio.Reader) (string, error)

ReadUntilSemiColon returns a string (without the ending \n) from the input buffered reader, ending at ';' or at end of file It allows to read a newick tree on several lines An error is returned iff there is an error with the buffered reader.

func Readln

func Readln(r *bufio.Reader) (string, error)

Readln returns a single line (without the ending \n) from the input buffered reader. An error is returned iff there is an error with the buffered reader.