apps

package module

v0.0.0-...-4206233 Latest Latest Go to latest Published: Dec 19, 2013 License: MIT Imports: 0 Imported by: 0

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This package provides simplified wrappers around computational biology tools that are typically operated from the command line.

Documentation for this package can be found here:

Once you have Go installed, just run

go get github.com/TuftsBCB/apps

to install the packages.

Package apps provides simplified wrappers around computational biology tools that are typically operated from the command line.

Path	Synopsis
blast Package blast provides functions and types to help with running any of the BLAST suite of programs.	Package blast provides functions and types to help with running any of the BLAST suite of programs.
hhsuite Package hhsuite provides convenient wrappers for running programs found in hhsuite like hhsearch, hhblits and hhmake.	Package hhsuite provides convenient wrappers for running programs found in hhsuite like hhsearch, hhblits and hhmake.
matt Package matt provides a relatively bare bones blackbox for running Matt and easily gathering results like RMSD, core length and a p-value.	Package matt provides a relatively bare bones blackbox for running Matt and easily gathering results like RMSD, core length and a p-value.
example/rmsd Example rmsd shows how to use the matt package to invoke Matt on multiple argument sets in parallel.	Example rmsd shows how to use the matt package to invoke Matt on multiple argument sets in parallel.