cmd

Jun 12, 2016

Changes in this version

+ var VERSION = "0.2.5"

Apr 26, 2016

Changes in this version

type Config

+ ValidateSeqLength int

Apr 24, 2016

Changes in this version

type BedFeature

+ func ReadBedFilteredFeatures(file string, chrs []string) ([]BedFeature, error)

Apr 21, 2016

Changes in this version

+ type Config struct

+ Alphabet *seq.Alphabet

+ AlphabetGuessSeqLength int

+ BufferSize int

+ ChunkSize int

+ IDNCBI bool

+ IDRegexp string

+ LineWidth int

+ OutFile string

+ Quiet bool

+ Threads int

Mar 27, 2016

Changes in this version

+ var Threads = runtime.NumCPU()

Mar 24, 2016

Changes in this version

+ type BedFeature struct

+ Chr string

+ End int

+ Name *string

+ Start int

+ Strand *string

+ func ReadBedFeatures(file string) ([]BedFeature, error)

Mar 13, 2016

Changes in this version

+ var RootCmd = &cobra.Command

+ func Execute()

+ func MD5(s []byte) string

+ type LocationChunk struct

+ Data []LocationInfo

+ ID uint64

+ type LocationInfo struct

+ Locations [][]int

+ PatternName string

+ Record *fasta.FastaRecord

+ Strand int