README
¶
#Store
##Installation
$ go get github.com/biogo/store/...
##Overview
Store provides a number of data store types that are useful for bioinformatic analysis.
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Left-Leaning Red-Black tree
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Interval tree
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k-d tree
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Run-length encoding data store
Citing
If you use bíogo, please cite Kortschak and Adelson "bíogo: a simple high-performance bioinformatics toolkit for the Go language", doi:10.1101/005033.
##Library Structure and Coding Style
The coding style should be aligned with normal Go idioms as represented in the Go core libraries.
##Copyright and License
Copyright ©2011-2013 The bíogo Authors except where otherwise noted. All rights reserved. Use of this source code is governed by a BSD-style license that can be found in the LICENSE file.
The bíogo logo is derived from Bitstream Charter, Copyright ©1989-1992 Bitstream Inc., Cambridge, MA.
BITSTREAM CHARTER is a registered trademark of Bitstream Inc.
Directories
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| Path | Synopsis |
|---|---|
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Package interval implements an interval tree based on an augmented Left-Leaning Red Black tree.
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Package interval implements an interval tree based on an augmented Left-Leaning Red Black tree. |
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landscape
Package landscape implements persistence landscape calculation for a set of intervals.
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Package landscape implements persistence landscape calculation for a set of intervals. |
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Package kdtree implements a k-d tree.
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Package kdtree implements a k-d tree. |
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Package llrb implements Left-Leaning Red Black trees as described by Robert Sedgewick.
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Package llrb implements Left-Leaning Red Black trees as described by Robert Sedgewick. |
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Package step implements a step vector type.
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Package step implements a step vector type. |