Directories ¶
Path | Synopsis |
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ent
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exact
package exact contains interface for exact-matching strings to known scientific names.
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package exact contains interface for exact-matching strings to known scientific names. |
fuzzy
package fuzzy contains interfaces and code to facilitate fuzzy-matching of name-strings to scientific names collected in gnames database.
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package fuzzy contains interfaces and code to facilitate fuzzy-matching of name-strings to scientific names collected in gnames database. |
matcher
package matcher is the central processing unit for matching name-strings to known scientific names.
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package matcher is the central processing unit for matching name-strings to known scientific names. |
virus
package virus contains an interface for matching strings to names of viruses, plasmids, prions and other non-cellular entities.
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package virus contains an interface for matching strings to names of viruses, plasmids, prions and other non-cellular entities. |
io
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bloom
package bloom creates and serves bloom filters for stemmed canonical names, and names of viruses.
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package bloom creates and serves bloom filters for stemmed canonical names, and names of viruses. |
dbase
package dbase provides convenience methods for accessing PostgreSQL database.
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package dbase provides convenience methods for accessing PostgreSQL database. |
rest
package rest provides http REST interface to gnmatcher functionality.
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package rest provides http REST interface to gnmatcher functionality. |
trie
package trie implements FuzzyMatcher interface that is responsible for fuzzy-matching strings to canonical forms of scientific names.
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package trie implements FuzzyMatcher interface that is responsible for fuzzy-matching strings to canonical forms of scientific names. |
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