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nexus

package

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Versions in this module

v0

v0.4.1

Mar 10, 2021

v0.4.0

Mar 9, 2020

v0.3.1

Sep 30, 2019

v0.3.0

Apr 29, 2019

v0.2.11

Aug 2, 2018

v0.2.10

Mar 27, 2018

v0.2.9

Mar 6, 2018

v0.2.7

Jan 30, 2018

Changes in this version

type Token

+ const COMMA

+ const TRANSLATE

v0.2.6

Jan 9, 2018

v0.2.5

Jan 8, 2018

v0.2.4

Nov 6, 2017

v0.2.3

Sep 1, 2017

Changes in this version

+ func WriteNexus(tchan <-chan tree.Trees) (string, error)

+ type Nexus struct

+ GapChar rune

+ HasAlignment bool

+ HasTrees bool

+ MissingChar rune

+ func NewNexus() *Nexus

+ func (n *Nexus) AddTree(name string, t *tree.Tree)

+ func (n *Nexus) Alignment() align.Alignment

+ func (n *Nexus) FirstTree() *tree.Tree

+ func (n *Nexus) IterateTrees(it func(string, *tree.Tree))

+ func (n *Nexus) NTrees() int

+ func (n *Nexus) SetAlignment(align align.Alignment)

+ type Parser struct

+ func NewParser(r io.Reader) *Parser

+ func (p *Parser) Parse() (*Nexus, error)

+ type Scanner struct

+ func NewScanner(r io.Reader) *Scanner

+ func (s *Scanner) Scan() (tok Token, lit string)

+ type Token int64

+ const BEGIN

+ const CLOSEBRACK

+ const DATA

+ const DATATYPE

+ const DIMENSIONS

+ const END

+ const ENDOFCOMMAND

+ const ENDOFLINE

+ const EOF

+ const EQUAL

+ const FORMAT

+ const GAP

+ const IDENT

+ const ILLEGAL

+ const MATRIX

+ const MISSING

+ const NCHAR

+ const NEXUS

+ const NTAX

+ const NUMERIC

+ const OPENBRACK

+ const TAXA

+ const TAXLABELS

+ const TREE

+ const TREES

+ const WS